Download MendeleyMolecular Structure of Dtdp-Glucose 4,6-Dehydratase from E. Coli
Thoden, J.B., Hegeman, A.D., Frey, P.A., Holden, H.M.(null) Protein Sci
1BXK
DTDP-GLUCOSE 4,6-DEHYDRATASE FROM E. COLI
- PDB DOI: https://doi.org/10.2210/pdb1BXK/pdb
- Classification: LYASE
- Organism(s): Escherichia coli
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 1998-10-05 Released: 1998-10-14
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Work: 0.195
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| PROTEIN (DTDP-GLUCOSE 4,6-DEHYDRATASE) | 355 | Escherichia coli | Mutation(s): 0 EC: 4.2.1.46 |  | |
UniProt | |||||
Find proteins for P27830 (Escherichia coli (strain K12)) Explore P27830 Go to UniProtKB: P27830 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P27830 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAD Query on NAD | C [auth A], D [auth B] | NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Work: 0.195
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 68.4 | α = 90 |
| b = 109.2 | β = 90 |
| c = 128.7 | γ = 90 |
| Software Name | Purpose |
|---|---|
| TNT | refinement |
| XDS | data reduction |
| XSCALIBRE | data scaling |
Entry History
Deposition Data
- Released Date: 1998-10-14 Deposition Author(s): Thoden, J.B., Hegeman, A.D., Frey, P.A., Holden, H.M.
Revision History (Full details and data files)
- Version 1.0: 1998-10-14
Type: Initial release - Version 1.1: 2008-04-27
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2024-02-07
Changes: Data collection, Database references, Derived calculations
