Download MendeleyExo-B-(1,3)-Glucanase from Candida Albicans in complex with unhydrolysed and covalently linked 2,4-dinitrophenyl-2-deoxy-2-fluoro-B-D-glucopyranoside at 1.9 A
Cutfield, S.M., Cutfield, J.F., Davies, G.J., Sullivan, P.A.To be published.
2PB1
Exo-B-(1,3)-Glucanase from Candida Albicans in complex with unhydrolysed and covalently linked 2,4-dinitrophenyl-2-deoxy-2-fluoro-B-D-glucopyranoside at 1.9 A
- PDB DOI: https://doi.org/10.2210/pdb2PB1/pdb
- Classification: HYDROLASE
- Organism(s): Candida albicans
- Expression System: Saccharomyces cerevisiae
- Mutation(s): No
- Deposited: 2007-03-28 Released: 2007-04-10
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.162
- R-Value Work: 0.133
- R-Value Observed: 0.135
Starting Model: experimental
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This is version 1.6 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hypothetical protein XOG1 | 400 | Candida albicans | Mutation(s): 0 Gene Names: EXG EC: 3.2.1.58 (PDB Primary Data), 2.4.1 (UniProt) |  | |
UniProt | |||||
Find proteins for P29717 (Candida albicans (strain SC5314 / ATCC MYA-2876)) Explore P29717 Go to UniProtKB: P29717 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P29717 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NFG Query on NFG | C [auth A] | 2,4-dinitrophenyl 2-deoxy-2-fluoro-beta-D-glucopyranoside C12 H13 F N2 O9 UFSBFVZQJZMIOU-LZQZFOIKSA-N |  | ||
| G2F Query on G2F | B [auth A] | 2-deoxy-2-fluoro-alpha-D-glucopyranose C6 H11 F O5 ZCXUVYAZINUVJD-UKFBFLRUSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.162
- R-Value Work: 0.133
- R-Value Observed: 0.135
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 60.149 | α = 90 |
| b = 65.586 | β = 90 |
| c = 96.966 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| AMoRE | phasing |
Entry History
Deposition Data
- Released Date: 2007-04-10 Deposition Author(s): Cutfield, S.M., Cutfield, J.F., Davies, G.J., Sullivan, P.A.
Revision History (Full details and data files)
- Version 1.0: 2007-04-10
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Non-polymer description, Version format compliance - Version 1.3: 2017-10-18
Changes: Refinement description - Version 1.4: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Structure summary - Version 1.5: 2023-08-30
Changes: Data collection, Database references, Refinement description, Structure summary - Version 1.6: 2024-11-20
Changes: Structure summary
