1OAZ
IgE Fv SPE7 complexed with a recombinant thioredoxin
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth H] | V-set_8 | e1oazH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
D [auth J] | V-set_8 | e1oazJ1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
E [auth L] | V-set_3 | e1oazL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_3 | ECOD (1.6) |
F [auth N] | V-set_3 | e1oazN1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_3 | ECOD (1.6) |
A | Thioredoxin | e1oazA1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin | ECOD (1.6) |
B | Thioredoxin | e1oazB1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: Thioredoxin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
D [auth J] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
E [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
F [auth N] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
A | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
B | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
C [auth H], D [auth J] | SPE-7 Fv, anti-2,4-dinitrophenyl (DNP) IgE antibody SPE-7 | VH | Mus musculus (house mouse) | IGHV1-72*01, IGHJ2*01 | V-DOMAIN VH | IG | FV-HEAVY_LAMBDA | IMGT (202445-0) |
E [auth L], F [auth N] | SPE-7 Fv, anti-2,4-dinitrophenyl (DNP) IgE antibody SPE-7 | V-LAMBDA | Mus musculus (house mouse) | IGLV1*01, IGLJ1*01 | V-DOMAIN V-LAMBDA | IG | FV-HEAVY_LAMBDA | IMGT (202445-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
C [auth H], D [auth J] | Heavy Chain | IGHV1 | - | thioredoxin 1 | SAbDab (2024-11-15) |
E [auth L], F [auth N] | Light Chain | IGLV1 | Lambda | thioredoxin 1 | SAbDab (2024-11-15) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
E [auth L], F [auth N] | PF07686 | Immunoglobulin V-set domain (V-set) | Immunoglobulin V-set domain | This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. | Domain |
PF00085 | Thioredoxin (Thioredoxin) | Thioredoxin | Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
C [auth H], D [auth J] | IMMUNOGLOBULIN E | - | - | - |
E [auth L], F [auth N] | IMMUNOGLOBULIN E | - | ||
THIOREDOXIN 1 |
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InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
E [auth L], F [auth N] | IPR050150 | Immunoglobulin Variable Light Chain | Family |
E [auth L], F [auth N] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
E [auth L], F [auth N] | IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily |
E [auth L], F [auth N] | IPR013106 | Immunoglobulin V-set domain | Domain |
E [auth L], F [auth N] | IPR003599 | Immunoglobulin domain subtype | Domain |
E [auth L], F [auth N] | IPR007110 | Immunoglobulin-like domain | Domain |
IPR017937 | Thioredoxin, conserved site | Conserved Site | |
IPR013766 | Thioredoxin domain | Domain | |
IPR005746 | Thioredoxin | Family | |
IPR036249 | Thioredoxin-like superfamily | Homologous Superfamily |