Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyTATA-box binding protein-like 8036364 3000705 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyDNA-glycosylase 8038321 3000905 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyDNA-glycosylase 8038321 3000905 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTATA-box binding protein-like 8036364 3000705 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHhH-GPDe1pvsA1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: DNA-glycosylaseF: HhH-GPDECOD (1.6)
AAlkA_Ne1pvsA2 A: a+b two layersX: TBP-likeH: TATA-box binding protein-like (From Topology)T: TATA-box binding protein-likeF: AlkA_NECOD (1.6)
BHhH-GPDe1pvsB1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: DNA-glycosylaseF: HhH-GPDECOD (1.6)
BAlkA_Ne1pvsB2 A: a+b two layersX: TBP-likeH: TATA-box binding protein-like (From Topology)T: TATA-box binding protein-likeF: AlkA_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF06029AlkA N-terminal domain (AlkA_N)AlkA N-terminal domain- Domain
A, B
PF00730HhH-GPD superfamily base excision DNA repair protein (HhH-GPD)HhH-GPD superfamily base excision DNA repair proteinThis family contains a diverse range of structurally related DNA repair proteins. The superfamily is called the HhH-GPD family after its hallmark Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate [2]. This includes endonucle ...This family contains a diverse range of structurally related DNA repair proteins. The superfamily is called the HhH-GPD family after its hallmark Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate [2]. This includes endonuclease III, EC:4.2.99.18 and MutY an A/G-specific adenine glycosylase, both have a C terminal 4Fe-4S cluster. The family also includes 8-oxoguanine DNA glycosylases such as Swiss:P53397. The methyl-CPG binding protein MBD4 Swiss:Q9Z2D7 also contains a related domain [1] that is a thymine DNA glycosylase. The family also includes DNA-3-methyladenine glycosylase II EC:3.2.2.21 and other members of the AlkA family.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
DNA-3-methyladenine glycosylase II