1R8D
Crystal Structure of MtaN Bound to DNA
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | d1r8da_ | All alpha proteins | Putative DNA-binding domain | Putative DNA-binding domain | DNA-binding N-terminal domain of transcription activators | Multidrug transporter activator MtaN | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
D [auth B] | d1r8db_ | All alpha proteins | Putative DNA-binding domain | Putative DNA-binding domain | DNA-binding N-terminal domain of transcription activators | Multidrug transporter activator MtaN | (Bacillus subtilis ) [TaxId: 1423 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2 Family | DNA-binding N-terminal domain of transcription activators | 8026402 | 4000766 | SCOP2 (2022-06-29) |
C [auth A] | SCOP2 Superfamily | Putative DNA-binding domain | 8038781 | 3000158 | SCOP2 (2022-06-29) |
C [auth A] | SCOP2 Superfamily | Dimerization domain of Mer-like transcriptional regulators | 8061312 | 3002692 | SCOP2 (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Putative DNA-binding domain | 8038781 | 3000158 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Dimerization domain of Mer-like transcriptional regulators | 8061312 | 3002692 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | MerR_1 | e1r8dA1 | A: alpha arrays | X: HTH | H: HTH | T: Putative DNA-binding domain | F: MerR_1 | ECOD (1.6) |
D [auth B] | MerR_1 | e1r8dB1 | A: alpha arrays | X: HTH | H: HTH | T: Putative DNA-binding domain | F: MerR_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 1.10.1660.10 | Mainly Alpha | Orthogonal Bundle | Multidrug-efflux Transporter Regulator | Chain: A | CATH (4.3.0) |
D [auth B] | 1.10.1660.10 | Mainly Alpha | Orthogonal Bundle | Multidrug-efflux Transporter Regulator | Chain: A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], D [auth B] | PF09278 | MerR, DNA binding (MerR-DNA-bind) | MerR, DNA binding | Members of this family of DNA-binding domains are predominantly found in the prokaryotic transcriptional regulator MerR. They adopt a structure consisting of a core of three alpha helices, with an architecture that is similar to that of the 'winged h ... | Domain |
C [auth A], D [auth B] | PF00376 | MerR family regulatory protein (MerR) | MerR family regulatory protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
B [auth D] | 26-MER | - | - | - |
C [auth A], D [auth B] | transcription activator MtaN | - | ||
A [auth C] | 26-MER | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], D [auth B] | IPR009061 | Putative DNA-binding domain superfamily | Homologous Superfamily |
C [auth A], D [auth B] | IPR047057 | MerR transcriptional regulator | Family |
C [auth A], D [auth B] | IPR012925 | TipAS antibiotic-recognition domain | Domain |
C [auth A], D [auth B] | IPR036244 | TipA-like multidrug resistance regulator, antibiotic-recognition domain | Homologous Superfamily |
C [auth A], D [auth B] | IPR000551 | MerR-type HTH domain | Domain |