Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1w1wa_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like Smc head domain BAKER'S YEAST (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Bd1w1wb_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like Smc head domain BAKER'S YEAST (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Cd1w1wc_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like Smc head domain BAKER'S YEAST (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Dd1w1wd_ Alpha and beta proteins (a/b) P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like Smc head domain BAKER'S YEAST (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Ed1w1we_ All alpha proteins DNA/RNA-binding 3-helical bundle 'Winged helix' DNA-binding domain Rad21/Rec8-like Sister chromatid cohesion protein 1 (SCC1), C-terminal domain BAKER'S YEAST (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Fd1w1wf_ All alpha proteins DNA/RNA-binding 3-helical bundle 'Winged helix' DNA-binding domain Rad21/Rec8-like Sister chromatid cohesion protein 1 (SCC1), C-terminal domain BAKER'S YEAST (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Gd1w1wg_ All alpha proteins DNA/RNA-binding 3-helical bundle 'Winged helix' DNA-binding domain Rad21/Rec8-like Sister chromatid cohesion protein 1 (SCC1), C-terminal domain BAKER'S YEAST (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Hd1w1wh_ All alpha proteins DNA/RNA-binding 3-helical bundle 'Winged helix' DNA-binding domain Rad21/Rec8-like Sister chromatid cohesion protein 1 (SCC1), C-terminal domain BAKER'S YEAST (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilySMC-like 8056733 4004016 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyABC transporter-like P-loop ATPases 8056734 3002020 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyABC transporter-like P-loop ATPases 8056734 3002020 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyABC transporter-like P-loop ATPases 8056734 3002020 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyABC transporter-like P-loop ATPases 8056734 3002020 SCOP2B (2022-06-29)
ESCOP2 FamilyRad21/Rec8-like 8003273 4000258 SCOP2 (2022-06-29)
ESCOP2 SuperfamilyWinged helix DNA-binding domain 8003274 3000034 SCOP2 (2022-06-29)
FSCOP2B SuperfamilyWinged helix DNA-binding domain 8003274 3000034 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyWinged helix DNA-binding domain 8003274 3000034 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyWinged helix DNA-binding domain 8003274 3000034 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASMC_Ne1w1wA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SMC_NECOD (1.6)
BSMC_Ne1w1wB1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SMC_NECOD (1.6)
CSMC_Ne1w1wC1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SMC_NECOD (1.6)
DSMC_Ne1w1wD1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SMC_NECOD (1.6)
ERad21_Rec8e1w1wE1 A: alpha arraysX: HTHH: HTHT: wingedF: Rad21_Rec8ECOD (1.6)
FRad21_Rec8e1w1wF1 A: alpha arraysX: HTHH: HTHT: wingedF: Rad21_Rec8ECOD (1.6)
GRad21_Rec8e1w1wG1 A: alpha arraysX: HTHH: HTHT: wingedF: Rad21_Rec8ECOD (1.6)
HRad21_Rec8e1w1wH1 A: alpha arraysX: HTHH: HTHT: wingedF: Rad21_Rec8ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF02463RecF/RecN/SMC N terminal domain (SMC_N)RecF/RecN/SMC N terminal domainThis domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. T ...This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics [1]. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Domain
E, F, G, H
PF04824Conserved region of Rad21 / Rec8 like protein (Rad21_Rec8)Conserved region of Rad21 / Rec8 like protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
STRUCTURAL MAINTENANCE OF CHROMOSOME 1
E, F, G, H
SISTER CHROMATID COHESION PROTEIN 1