1XJK
Structural mechanism of allosteric substrate specificity in a ribonucleotide reductase: dGTP-ADP complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ribonuc_red_lgN_1 | e1xjkA1 | A: alpha arrays | X: RuvA-C | H: ATP cone (From Topology) | T: ATP cone | F: Ribonuc_red_lgN_1 | ECOD (1.6) |
A | Ribonuc_red_lgC | e1xjkA2 | A: a/b barrels | X: Ten stranded beta/alpha barrel (From Topology) | H: Ten stranded beta/alpha barrel (From Topology) | T: Ten stranded beta/alpha barrel | F: Ribonuc_red_lgC | ECOD (1.6) |
B | Ribonuc_red_lgN_1 | e1xjkB2 | A: alpha arrays | X: RuvA-C | H: ATP cone (From Topology) | T: ATP cone | F: Ribonuc_red_lgN_1 | ECOD (1.6) |
B | Ribonuc_red_lgC | e1xjkB1 | A: a/b barrels | X: Ten stranded beta/alpha barrel (From Topology) | H: Ten stranded beta/alpha barrel (From Topology) | T: Ten stranded beta/alpha barrel | F: Ribonuc_red_lgC | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.70.20 | Alpha Beta | Alpha-Beta Barrel | Anaerobic Ribonucleotide-triphosphate Reductase Large Chain | CATH (4.3.0) | |
B | 3.20.70.20 | Alpha Beta | Alpha-Beta Barrel | Anaerobic Ribonucleotide-triphosphate Reductase Large Chain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02867 | Ribonucleotide reductase, barrel domain (Ribonuc_red_lgC) | Ribonucleotide reductase, barrel domain | - | Family | |
PF00317 | Ribonucleotide reductase, all-alpha domain (Ribonuc_red_lgN) | Ribonucleotide reductase, all-alpha domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008926 | Ribonucleotide reductase R1 subunit, N-terminal | Homologous Superfamily | |
IPR013509 | Ribonucleotide reductase large subunit, N-terminal | Domain | |
IPR013344 | Ribonucleotide reductase, adenosylcobalamin-dependent | Family | |
IPR000788 | Ribonucleotide reductase large subunit, C-terminal | Domain | |
IPR050862 | Ribonucleoside diphosphate reductase class-2 | Family |