2BGJ
X-Ray Structure of the Ferredoxin-NADP(H) Reductase from Rhodobacter capsulatus at 2.1 Angstroms
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FAD_binding_6 | e2bgjA5 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: FAD_binding_6 | ECOD (1.6) |
A | NAD_binding_1 | e2bgjA6 | A: a/b three-layered sandwiches | X: Ferredoxin reductase-like, C-terminal NADP-linked domain (From Topology) | H: Ferredoxin reductase-like, C-terminal NADP-linked domain (From Topology) | T: Ferredoxin reductase-like, C-terminal NADP-linked domain | F: NAD_binding_1 | ECOD (1.6) |
B | FAD_binding_6 | e2bgjB5 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: FAD_binding_6 | ECOD (1.6) |
B | NAD_binding_1 | e2bgjB6 | A: a/b three-layered sandwiches | X: Ferredoxin reductase-like, C-terminal NADP-linked domain (From Topology) | H: Ferredoxin reductase-like, C-terminal NADP-linked domain (From Topology) | T: Ferredoxin reductase-like, C-terminal NADP-linked domain | F: NAD_binding_1 | ECOD (1.6) |
C | FAD_binding_6 | e2bgjC5 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: FAD_binding_6 | ECOD (1.6) |
C | NAD_binding_1 | e2bgjC6 | A: a/b three-layered sandwiches | X: Ferredoxin reductase-like, C-terminal NADP-linked domain (From Topology) | H: Ferredoxin reductase-like, C-terminal NADP-linked domain (From Topology) | T: Ferredoxin reductase-like, C-terminal NADP-linked domain | F: NAD_binding_1 | ECOD (1.6) |
D | FAD_binding_6 | e2bgjD5 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: FAD_binding_6 | ECOD (1.6) |
D | NAD_binding_1 | e2bgjD6 | A: a/b three-layered sandwiches | X: Ferredoxin reductase-like, C-terminal NADP-linked domain (From Topology) | H: Ferredoxin reductase-like, C-terminal NADP-linked domain (From Topology) | T: Ferredoxin reductase-like, C-terminal NADP-linked domain | F: NAD_binding_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.30.10 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
A | 3.40.50.80 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | CATH (4.3.0) |
B | 2.40.30.10 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
B | 3.40.50.80 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | CATH (4.3.0) |
C | 2.40.30.10 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
C | 3.40.50.80 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | CATH (4.3.0) |
D | 2.40.30.10 | Mainly Beta | Beta Barrel | Elongation Factor Tu (Ef-tu) | domain 3 | CATH (4.3.0) |
D | 3.40.50.80 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00175 | Oxidoreductase NAD-binding domain (NAD_binding_1) | Oxidoreductase NAD-binding domain | Xanthine dehydrogenases, that also bind FAD/NAD, have essentially no similarity. | Domain | |
PF00970 | Oxidoreductase FAD-binding domain (FAD_binding_6) | Oxidoreductase FAD-binding domain | - | Domain |