2VNV

Crystal structure of BclA lectin from burkholderia cenocepacia in complex with alpha-methyl-mannoside at 1.7 Angstrom resolution

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd2vnvb_ All beta proteins Calcium-mediated lectin Calcium-mediated lectin automated matches automated matches (Burkholderia cenocepacia J2315 ) [TaxId: 216591 ], SCOPe (2.08)
Cd2vnvc_ All beta proteins Calcium-mediated lectin Calcium-mediated lectin automated matches automated matches (Burkholderia cenocepacia J2315 ) [TaxId: 216591 ], SCOPe (2.08)
Ad2vnva_ All beta proteins Calcium-mediated lectin Calcium-mediated lectin automated matches automated matches (Burkholderia cenocepacia J2315 ) [TaxId: 216591 ], SCOPe (2.08)
Dd2vnvd_ All beta proteins Calcium-mediated lectin Calcium-mediated lectin automated matches automated matches (Burkholderia cenocepacia J2315 ) [TaxId: 216591 ], SCOPe (2.08)
Ed2vnve_ All beta proteins Calcium-mediated lectin Calcium-mediated lectin automated matches automated matches (Burkholderia cenocepacia J2315 ) [TaxId: 216591 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyCalcium-mediated lectin 8087614 3001391 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCalcium-mediated lectin 8087614 3001391 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCalcium-mediated lectin 8087614 3001391 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCalcium-mediated lectin 8087614 3001391 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyCalcium-mediated lectin 8087614 3001391 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPA-IILe2vnvB1 A: beta sandwichesX: jelly-rollH: Calcium-mediated lectin (From Topology)T: Calcium-mediated lectinF: PA-IILECOD (1.6)
CPA-IILe2vnvC1 A: beta sandwichesX: jelly-rollH: Calcium-mediated lectin (From Topology)T: Calcium-mediated lectinF: PA-IILECOD (1.6)
APA-IILe2vnvA1 A: beta sandwichesX: jelly-rollH: Calcium-mediated lectin (From Topology)T: Calcium-mediated lectinF: PA-IILECOD (1.6)
DPA-IILe2vnvD1 A: beta sandwichesX: jelly-rollH: Calcium-mediated lectin (From Topology)T: Calcium-mediated lectinF: PA-IILECOD (1.6)
EPA-IILe2vnvE1 A: beta sandwichesX: jelly-rollH: Calcium-mediated lectin (From Topology)T: Calcium-mediated lectinF: PA-IILECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.120.400 Mainly Beta Sandwich Jelly Rolls Calcium-mediated lectinCATH (4.3.0)
C2.60.120.400 Mainly Beta Sandwich Jelly Rolls Calcium-mediated lectinCATH (4.3.0)
A2.60.120.400 Mainly Beta Sandwich Jelly Rolls Calcium-mediated lectinCATH (4.3.0)
D2.60.120.400 Mainly Beta Sandwich Jelly Rolls Calcium-mediated lectinCATH (4.3.0)
E2.60.120.400 Mainly Beta Sandwich Jelly Rolls Calcium-mediated lectinCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF07472Fucose-binding lectin II (PA-IIL) (PA-IIL)Fucose-binding lectin II (PA-IIL)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
BCLA - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR036684Calcium-mediated lectin superfamilyHomologous Superfamily
A, B, C, D, E
IPR010907Calcium-mediated lectinDomain