Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2w3ra2 All alpha proteins CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Ad2w3ra1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) 2Fe-2S ferredoxin-like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Ad2w3ra4 Alpha and beta proteins (a+b) CO dehydrogenase flavoprotein C-domain-like CO dehydrogenase flavoprotein C-terminal domain-like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Ad2w3ra3 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Cd2w3rc2 All alpha proteins CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Cd2w3rc1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) 2Fe-2S ferredoxin-like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Cd2w3rc4 Alpha and beta proteins (a+b) CO dehydrogenase flavoprotein C-domain-like CO dehydrogenase flavoprotein C-terminal domain-like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Cd2w3rc3 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Ed2w3re2 All alpha proteins CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Ed2w3re1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) 2Fe-2S ferredoxin-like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Ed2w3re4 Alpha and beta proteins (a+b) CO dehydrogenase flavoprotein C-domain-like CO dehydrogenase flavoprotein C-terminal domain-like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Ed2w3re3 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Gd2w3rg2 All alpha proteins CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Gd2w3rg1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) 2Fe-2S ferredoxin-like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Gd2w3rg4 Alpha and beta proteins (a+b) CO dehydrogenase flavoprotein C-domain-like CO dehydrogenase flavoprotein C-terminal domain-like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Gd2w3rg3 Alpha and beta proteins (a+b) FAD-binding/transporter-associated domain-like FAD-binding/transporter-associated domain-like automated matches automated matches (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Bd2w3rb1 Alpha and beta proteins (a+b) alpha/beta-Hammerhead CO dehydrogenase molybdoprotein N-domain-like CO dehydrogenase molybdoprotein N-domain-like Xanthine dehydrogenase chain B, N-terminal domain (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Bd2w3rb2 Alpha and beta proteins (a+b) Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Xanthine dehydrogenase chain B, C-terminal domain (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Dd2w3rd1 Alpha and beta proteins (a+b) alpha/beta-Hammerhead CO dehydrogenase molybdoprotein N-domain-like CO dehydrogenase molybdoprotein N-domain-like Xanthine dehydrogenase chain B, N-terminal domain (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Dd2w3rd2 Alpha and beta proteins (a+b) Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Xanthine dehydrogenase chain B, C-terminal domain (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Fd2w3rf1 Alpha and beta proteins (a+b) alpha/beta-Hammerhead CO dehydrogenase molybdoprotein N-domain-like CO dehydrogenase molybdoprotein N-domain-like Xanthine dehydrogenase chain B, N-terminal domain (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Fd2w3rf2 Alpha and beta proteins (a+b) Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Xanthine dehydrogenase chain B, C-terminal domain (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Hd2w3rh1 Alpha and beta proteins (a+b) alpha/beta-Hammerhead CO dehydrogenase molybdoprotein N-domain-like CO dehydrogenase molybdoprotein N-domain-like Xanthine dehydrogenase chain B, N-terminal domain (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)
Hd2w3rh2 Alpha and beta proteins (a+b) Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Molybdenum cofactor-binding domain Xanthine dehydrogenase chain B, C-terminal domain (Rhodobacter capsulatus ) [TaxId: 1061 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8037294 3000913 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCO dehydrogenase ISP C-domain like 8037287 3000439 SCOP2B (2022-06-29)
ASCOP2B Superfamily2Fe-2S ferredoxin-like 8037290 3000113 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCO dehydrogenase flavoprotein C-terminal domain-like 8037293 3001921 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCO dehydrogenase ISP C-domain like 8037287 3000439 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCO dehydrogenase flavoprotein C-terminal domain-like 8037293 3001921 SCOP2B (2022-06-29)
CSCOP2B Superfamily2Fe-2S ferredoxin-like 8037290 3000113 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8037294 3000913 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyCO dehydrogenase ISP C-domain like 8037287 3000439 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyCO dehydrogenase flavoprotein C-terminal domain-like 8037293 3001921 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8037294 3000913 SCOP2B (2022-06-29)
ESCOP2B Superfamily2Fe-2S ferredoxin-like 8037290 3000113 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyCO dehydrogenase ISP C-domain like 8037287 3000439 SCOP2B (2022-06-29)
GSCOP2B Superfamily2Fe-2S ferredoxin-like 8037290 3000113 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyFAD-binding/transporter-associated domain-like 8037294 3000913 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyCO dehydrogenase flavoprotein C-terminal domain-like 8037293 3001921 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyMolybdenum cofactor-binding domain 8037297 3000625 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCO dehydrogenase molybdoprotein N-domain-like 8037296 3000847 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCO dehydrogenase molybdoprotein N-domain-like 8037296 3000847 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyMolybdenum cofactor-binding domain 8037297 3000625 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyMolybdenum cofactor-binding domain 8037297 3000625 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCO dehydrogenase molybdoprotein N-domain-like 8037296 3000847 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyCO dehydrogenase molybdoprotein N-domain-like 8037296 3000847 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyMolybdenum cofactor-binding domain 8037297 3000625 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AFer2_2e2w3rA3 A: alpha bundlesX: CO dehydrogenase ISP C-domain like (From Topology)H: CO dehydrogenase ISP C-domain like (From Topology)T: CO dehydrogenase ISP C-domain likeF: Fer2_2ECOD (1.6)
AFer2e2w3rA4 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: Fer2ECOD (1.6)
ACO_deh_flav_Ce2w3rA2 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: CO_deh_flav_CECOD (1.6)
AFAD_binding_5e2w3rA1 A: a+b complex topologyX: FAD-binding domain-likeH: FAD-binding domain (From Topology)T: FAD-binding domainF: FAD_binding_5ECOD (1.6)
CFer2_2e2w3rC3 A: alpha bundlesX: CO dehydrogenase ISP C-domain like (From Topology)H: CO dehydrogenase ISP C-domain like (From Topology)T: CO dehydrogenase ISP C-domain likeF: Fer2_2ECOD (1.6)
CFer2e2w3rC4 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: Fer2ECOD (1.6)
CCO_deh_flav_Ce2w3rC2 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: CO_deh_flav_CECOD (1.6)
CFAD_binding_5e2w3rC1 A: a+b complex topologyX: FAD-binding domain-likeH: FAD-binding domain (From Topology)T: FAD-binding domainF: FAD_binding_5ECOD (1.6)
EFer2_2e2w3rE3 A: alpha bundlesX: CO dehydrogenase ISP C-domain like (From Topology)H: CO dehydrogenase ISP C-domain like (From Topology)T: CO dehydrogenase ISP C-domain likeF: Fer2_2ECOD (1.6)
EFer2e2w3rE4 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: Fer2ECOD (1.6)
ECO_deh_flav_Ce2w3rE2 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: CO_deh_flav_CECOD (1.6)
EFAD_binding_5e2w3rE1 A: a+b complex topologyX: FAD-binding domain-likeH: FAD-binding domain (From Topology)T: FAD-binding domainF: FAD_binding_5ECOD (1.6)
GFer2_2e2w3rG3 A: alpha bundlesX: CO dehydrogenase ISP C-domain like (From Topology)H: CO dehydrogenase ISP C-domain like (From Topology)T: CO dehydrogenase ISP C-domain likeF: Fer2_2ECOD (1.6)
GFer2e2w3rG4 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: Fer2ECOD (1.6)
GCO_deh_flav_Ce2w3rG2 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: CO_deh_flav_CECOD (1.6)
GFAD_binding_5e2w3rG1 A: a+b complex topologyX: FAD-binding domain-likeH: FAD-binding domain (From Topology)T: FAD-binding domainF: FAD_binding_5ECOD (1.6)
BAld_Xan_dh_C2e2w3rB4 A: a+b two layersX: MocoBD/DmpA-related (From Homology)H: MocoBD/DmpA-relatedT: Molybdenum cofactor-binding domainF: Ald_Xan_dh_C2ECOD (1.6)
BAld_Xan_dh_Ce2w3rB2 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: CO dehydrogenase molybdoprotein N-domain-likeF: Ald_Xan_dh_CECOD (1.6)
DAld_Xan_dh_C2e2w3rD4 A: a+b two layersX: MocoBD/DmpA-related (From Homology)H: MocoBD/DmpA-relatedT: Molybdenum cofactor-binding domainF: Ald_Xan_dh_C2ECOD (1.6)
DAld_Xan_dh_Ce2w3rD3 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: CO dehydrogenase molybdoprotein N-domain-likeF: Ald_Xan_dh_CECOD (1.6)
FAld_Xan_dh_C2e2w3rF4 A: a+b two layersX: MocoBD/DmpA-related (From Homology)H: MocoBD/DmpA-relatedT: Molybdenum cofactor-binding domainF: Ald_Xan_dh_C2ECOD (1.6)
FAld_Xan_dh_Ce2w3rF3 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: CO dehydrogenase molybdoprotein N-domain-likeF: Ald_Xan_dh_CECOD (1.6)
HAld_Xan_dh_C2e2w3rH4 A: a+b two layersX: MocoBD/DmpA-related (From Homology)H: MocoBD/DmpA-relatedT: Molybdenum cofactor-binding domainF: Ald_Xan_dh_C2ECOD (1.6)
HAld_Xan_dh_Ce2w3rH3 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: CO dehydrogenase molybdoprotein N-domain-likeF: Ald_Xan_dh_CECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.10.20.30 Alpha Beta Roll Ubiquitin-like (UB roll) Beta-grasp domainCATH (4.3.0)
A1.10.150.120 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
A3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 2CATH (4.3.0)
A3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
A3.30.390.50 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
C3.10.20.30 Alpha Beta Roll Ubiquitin-like (UB roll) Beta-grasp domainCATH (4.3.0)
C1.10.150.120 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
C3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 2CATH (4.3.0)
C3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
C3.30.390.50 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
E3.10.20.30 Alpha Beta Roll Ubiquitin-like (UB roll) Beta-grasp domainCATH (4.3.0)
E1.10.150.120 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
E3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 2CATH (4.3.0)
E3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
E3.30.390.50 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
G3.10.20.30 Alpha Beta Roll Ubiquitin-like (UB roll) Beta-grasp domainCATH (4.3.0)
G1.10.150.120 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
G3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 2CATH (4.3.0)
G3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase domain 3CATH (4.3.0)
G3.30.390.50 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
B3.90.1170.50 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase domain 3CATH (4.3.0)
B3.30.365.10 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase domain 4CATH (4.3.0)
D3.90.1170.50 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase domain 3CATH (4.3.0)
D3.30.365.10 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase domain 4CATH (4.3.0)
F3.90.1170.50 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase domain 3CATH (4.3.0)
F3.30.365.10 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase domain 4CATH (4.3.0)
H3.90.1170.50 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase domain 3CATH (4.3.0)
H3.30.365.10 Alpha Beta 2-Layer Sandwich Aldehyde Oxidoreductase domain 4CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E, G
PF01799[2Fe-2S] binding domain (Fer2_2)[2Fe-2S] binding domain- Domain
A, C, E, G
PF03450CO dehydrogenase flavoprotein C-terminal domain (CO_deh_flav_C)CO dehydrogenase flavoprotein C-terminal domain- Domain
A, C, E, G
PF001112Fe-2S iron-sulfur cluster binding domain (Fer2)2Fe-2S iron-sulfur cluster binding domain- Domain
B, D, F, H
PF01315Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain (Ald_Xan_dh_C)Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain- Domain
B, D, F, H
PF20256Molybdopterin cofactor-binding domain (MoCoBD_2)Molybdopterin cofactor-binding domain- Domain
B, D, F, H
PF02738Molybdopterin cofactor-binding domain (MoCoBD_1)Molybdopterin cofactor-binding domain- Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C, E, G
IPR016167FAD-binding, type PCMH, subdomain 1Homologous Superfamily
A, C, E, G
IPR036683CO dehydrogenase flavoprotein, C-terminal domain superfamilyHomologous Superfamily
A, C, E, G
IPR012175Xanthine dehydrogenase, small subunit, bacteriaFamily
A, C, E, G
IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
A, C, E, G
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
A, C, E, G
IPR0060582Fe-2S ferredoxin, iron-sulphur binding siteBinding Site
A, C, E, G
IPR016166FAD-binding domain, PCMH-typeDomain
A, C, E, G
IPR002346Molybdopterin dehydrogenase, FAD-bindingDomain
A, C, E, G
IPR014307Xanthine dehydrogenase, small subunitDomain
A, C, E, G
IPR002888[2Fe-2S]-bindingDomain
A, C, E, G
IPR036318FAD-binding, type PCMH-like superfamilyHomologous Superfamily
A, C, E, G
IPR016169FAD-binding, type PCMH, subdomain 2Homologous Superfamily
A, C, E, G
IPR036884[2Fe-2S]-binding domain superfamilyHomologous Superfamily
A, C, E, G
IPR016208Aldehyde oxidase/xanthine dehydrogenase-likeFamily
A, C, E, G
IPR012675Beta-grasp domain superfamilyHomologous Superfamily
A, C, E, G
IPR005107CO dehydrogenase flavoprotein, C-terminalDomain
B, D, F, H
IPR046867Aldehyde oxidase/xanthine dehydrogenase, second molybdopterin binding domainDomain
B, D, F, H
IPR000674Aldehyde oxidase/xanthine dehydrogenase, a/b hammerheadDomain
B, D, F, H
IPR014309Xanthine dehydrogenase, molybdopterin binding subunitDomain
B, D, F, H
IPR016208Aldehyde oxidase/xanthine dehydrogenase-likeFamily
B, D, F, H
IPR036856Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamilyHomologous Superfamily
B, D, F, H
IPR037165Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamilyHomologous Superfamily
B, D, F, H
IPR008274Aldehyde oxidase/xanthine dehydrogenase, first molybdopterin binding domainDomain