2XTS
Crystal Structure of the Sulfane Dehydrogenase SoxCD from Paracoccus pantotrophus
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Cytochrome_CBB3 | e2xtsB1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: Cytochrome_CBB3 | ECOD (1.6) |
D | Cytochrome_CBB3 | e2xtsD1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: Cytochrome_CBB3 | ECOD (1.6) |
A | Mo-co_dimer | e2xtsA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Mo-co_dimer | ECOD (1.6) |
A | Oxidored_molyb | e2xtsA2 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Sulfite oxidase, middle catalytic domain | F: Oxidored_molyb | ECOD (1.6) |
C | Mo-co_dimer | e2xtsC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Mo-co_dimer | ECOD (1.6) |
C | Oxidored_molyb | e2xtsC2 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Sulfite oxidase, middle catalytic domain | F: Oxidored_molyb | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.10.760.10 | Mainly Alpha | Orthogonal Bundle | Cytochrome Bc1 Complex | Chain D, domain 2 | CATH (4.3.0) |
D | 1.10.760.10 | Mainly Alpha | Orthogonal Bundle | Cytochrome Bc1 Complex | Chain D, domain 2 | CATH (4.3.0) |
A | 3.90.420.10 | Alpha Beta | Alpha-Beta Complex | Sulfite Oxidase | Chain A, domain 2 | CATH (4.3.0) |
A | 2.60.40.650 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
C | 3.90.420.10 | Alpha Beta | Alpha-Beta Complex | Sulfite Oxidase | Chain A, domain 2 | CATH (4.3.0) |
C | 2.60.40.650 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13442 | Cytochrome C oxidase, cbb3-type, subunit III (Cytochrome_CBB3) | Cytochrome C oxidase, cbb3-type, subunit III | - | Domain | |
PF00174 | Oxidoreductase molybdopterin binding domain (Oxidored_molyb) | Oxidoreductase molybdopterin binding domain | This domain is found in a variety of oxidoreductases. This domain binds to a molybdopterin cofactor. Xanthine dehydrogenases, that also bind molybdopterin, have essentially no similarity. | Domain | |
PF03404 | Mo-co oxidoreductase dimerisation domain (Mo-co_dimer) | Mo-co oxidoreductase dimerisation domain | This domain is found in molybdopterin cofactor (Mo-co) oxidoreductases. It is involved in dimer formation, and has an Ig-fold structure [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
CYTOCHROME | - | - | ||
SULFITE DEHYDROGENASE | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036909 | Cytochrome c-like domain superfamily | Homologous Superfamily | |
IPR009056 | Cytochrome c-like domain | Domain | |
IPR002327 | Cytochrome c, class IA/ IB | Family | |
IPR030835 | Sulfite dehydrogenase SoxC | Family | |
IPR000572 | Oxidoreductase, molybdopterin-binding domain | Domain | |
IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
IPR006311 | Twin-arginine translocation pathway, signal sequence | Conserved Site | |
IPR005066 | Moybdenum cofactor oxidoreductase, dimerisation | Domain | |
IPR008335 | Eukaryotic molybdopterin oxidoreductase | Family | |
IPR036374 | Oxidoreductase, molybdopterin-binding domain superfamily | Homologous Superfamily |