Crystal Structure of Dpo4 in complex with DNA containing the major cisplatin lesion
External Resource: Annotation
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A [auth B] | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8035590 | 3001272 | SCOP2B (2022-06-29) |
A [auth B] | SCOP2B Superfamily | Ta1206-like | 8055757 | 3001431 | SCOP2B (2022-06-29) |
A [auth B] | SCOP2B Superfamily | Lesion bypass DNA polymerase (Y-family), little finger domain | 8035589 | 3000579 | SCOP2B (2022-06-29) |
A [auth B] | SCOP2B Superfamily | Nucleotide cyclase/DNA polymerase palm domain-like | 8035590 | 3001272 | SCOP2B (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A [auth B] | IMS_HHH | e3m9mB7 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: SAM domain-like | F: IMS_HHH | ECOD (1.6) |
A [auth B] | IMS_C | e3m9mB6 | A: a+b two layers | X: Reverse ferredoxin | H: Lesion bypass DNA polymerase (Y-family), little finger domain (From Topology) | T: Lesion bypass DNA polymerase (Y-family), little finger domain | F: IMS_C | ECOD (1.6) |
A [auth B] | IMS | e3m9mB5 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: IMS | ECOD (1.6) |
A [auth B] | IMS_1 | e3m9mB8 | A: a+b three layers | X: Hypothetical protein Ta1206-like (From Topology) | H: Hypothetical protein Ta1206-like (From Topology) | T: Hypothetical protein Ta1206-like | F: IMS_1 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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C [auth T] | DNA (5'-D(*TP*CP*TP*GP*GP*CP*TP*TP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3') | - | - | - |
A [auth B] | DNA polymerase IV | | | |
B [auth P] | DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*AP*AP*G)-3') | - | - | - |