3MBI
Crystal structure of the phosphoribosylpyrophosphate (PRPP) synthetase from Thermoplasma volcanium in complex with ADP-Mg2+ and ribose 5-phosphate
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | d3mbic1 | Alpha and beta proteins (a/b) | PRTase-like | PRTase-like | automated matches | automated matches | (Thermoplasma volcanium ) [TaxId: 50339 ], | SCOPe (2.08) |
A | d3mbia1 | Alpha and beta proteins (a/b) | PRTase-like | PRTase-like | automated matches | automated matches | (Thermoplasma volcanium ) [TaxId: 50339 ], | SCOPe (2.08) |
A | d3mbia3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Thermoplasma volcanium ) [TaxId: 50339 ], | SCOPe (2.08) |
B | d3mbib1 | Alpha and beta proteins (a/b) | PRTase-like | PRTase-like | automated matches | automated matches | (Thermoplasma volcanium ) [TaxId: 50339 ], | SCOPe (2.08) |
B | d3mbib3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Thermoplasma volcanium ) [TaxId: 50339 ], | SCOPe (2.08) |
D | d3mbid1 | Alpha and beta proteins (a/b) | PRTase-like | PRTase-like | automated matches | automated matches | (Thermoplasma volcanium ) [TaxId: 50339 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | Pribosyltran_N | e3mbiC3 | A: a/b three-layered sandwiches | X: PRTase-like (From Topology) | H: PRTase-like (From Topology) | T: PRTase-like | F: Pribosyltran_N | ECOD (1.6) |
C | Pribosyl_synth | e3mbiC2 | A: a/b three-layered sandwiches | X: PRTase-like (From Topology) | H: PRTase-like (From Topology) | T: PRTase-like | F: Pribosyl_synth | ECOD (1.6) |
A | Pribosyltran_N | e3mbiA3 | A: a/b three-layered sandwiches | X: PRTase-like (From Topology) | H: PRTase-like (From Topology) | T: PRTase-like | F: Pribosyltran_N | ECOD (1.6) |
A | Pribosyl_synth | e3mbiA2 | A: a/b three-layered sandwiches | X: PRTase-like (From Topology) | H: PRTase-like (From Topology) | T: PRTase-like | F: Pribosyl_synth | ECOD (1.6) |
B | Pribosyltran_N | e3mbiB3 | A: a/b three-layered sandwiches | X: PRTase-like (From Topology) | H: PRTase-like (From Topology) | T: PRTase-like | F: Pribosyltran_N | ECOD (1.6) |
B | Pribosyl_synth | e3mbiB2 | A: a/b three-layered sandwiches | X: PRTase-like (From Topology) | H: PRTase-like (From Topology) | T: PRTase-like | F: Pribosyl_synth | ECOD (1.6) |
D | Pribosyltran_N | e3mbiD3 | A: a/b three-layered sandwiches | X: PRTase-like (From Topology) | H: PRTase-like (From Topology) | T: PRTase-like | F: Pribosyltran_N | ECOD (1.6) |
D | Pribosyl_synth | e3mbiD2 | A: a/b three-layered sandwiches | X: PRTase-like (From Topology) | H: PRTase-like (From Topology) | T: PRTase-like | F: Pribosyl_synth | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 3.40.50.2020 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
A | 3.40.50.2020 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
B | 3.40.50.2020 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
D | 3.40.50.2020 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13793 | N-terminal domain of ribose phosphate pyrophosphokinase (Pribosyltran_N) | N-terminal domain of ribose phosphate pyrophosphokinase | This family is frequently found N-terminal to the Pribosyltran, Pfam:PF00156. | Domain | |
PF00156 | Phosphoribosyl transferase domain (Pribosyltran) | Phosphoribosyl transferase domain | This family includes a range of diverse phosphoribosyl transferase enzymes. This family includes: Adenine phosphoribosyl-transferase EC:2.4.2.7, Swiss:P07672. Hypoxanthine-guanine-xanthine phosphoribosyl-transferase Swiss:P51900. Hypoxanthine phosph ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000836 | Phosphoribosyltransferase domain | Domain | |
IPR029057 | Phosphoribosyltransferase-like | Homologous Superfamily | |
IPR029099 | Ribose-phosphate pyrophosphokinase, N-terminal domain | Domain | |
IPR005946 | Ribose-phosphate pyrophosphokinase | Family | |
IPR037514 | Ribose-phosphate pyrophosphokinase, archaea | Family |