5EL5

Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
K [auth 2I]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
NB [auth 2A]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
OB [auth 3A]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
L [auth 3I]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
M [auth 4I]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
PB [auth 4A]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
P [auth 7I]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
SB [auth 7A]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
R [auth 9I]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
UB [auth 9A]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
S [auth AI]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
B [auth 1E]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
EB [auth 12]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
WB [auth BA]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
T [auth BI]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
CA [auth 11]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
CA [auth 11]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
EC [auth 19]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
EC [auth 19]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
C [auth 2E]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
C [auth 2E]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
FB [auth 22]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
FB [auth 22]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
DA [auth 21]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
FC [auth 29]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
EA [auth 31]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
GC [auth 39]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
HA [auth 61]SCOP2B SuperfamilyL9 N-domain-like 8042935 3000338 SCOP2B (2022-06-29)
HA [auth 61]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8042934 3000329 SCOP2B (2022-06-29)
JC [auth 69]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8042934 3000329 SCOP2B (2022-06-29)
JC [auth 69]SCOP2B SuperfamilyL9 N-domain-like 8042935 3000338 SCOP2B (2022-06-29)
IA [auth 58]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
KC [auth 15]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
JA [auth 68]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
LC [auth 25]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
MC [auth 35]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
KA [auth 78]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
LA [auth 88]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
NC [auth 45]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
MA [auth 98]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
OC [auth 55]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
D [auth 3E]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
GB [auth 32]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
NA [auth A8]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
PC [auth 65]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
OA [auth B8]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
QC [auth 75]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
PA [auth C8]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
RC [auth 85]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
SC [auth 95]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
QA [auth D8]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
TC [auth A5]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
RA [auth E8]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
SA [auth F8]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
UC [auth B5]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
TA [auth G8]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
VC [auth C5]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
XC [auth E5]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
VA [auth I8]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
YC [auth F5]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
WA [auth J8]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
HB [auth 42]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
HB [auth 42]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
E [auth 4E]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
E [auth 4E]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
ZC [auth G5]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
XA [auth K8]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
ZA [auth M8]SCOP2B SuperfamilyL28p-like 8033189 3001966 SCOP2B (2022-06-29)
AB [auth N8]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
BD [auth J5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
DD [auth M5]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
CB [auth Q8]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
G [auth 6E]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
JB [auth 62]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
I [auth 8E]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
LB [auth 82]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth 1I]Ribosomal_S10e5el51I1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
MB [auth 1A]Ribosomal_S10e5el51A1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
K [auth 2I]Ribosomal_S11e5el52I1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
NB [auth 2A]Ribosomal_S11e5el52A1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
OB [auth 3A]Ribosom_S12_S23e5el53A1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
L [auth 3I]Ribosom_S12_S23e5el53I1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
M [auth 4I]Ribosomal_S13_1e5el54I1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
PB [auth 4A]Ribosomal_S13_1e5el54A1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
QB [auth 5A]Ribosomal_S14e5el55A1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
N [auth 5I]Ribosomal_S14e5el55I1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
O [auth 6I]Ribosomal_S15_1e5el56I1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
RB [auth 6A]Ribosomal_S15_1e5el56A1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
P [auth 7I]Ribosomal_S16_1e5el57I1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
SB [auth 7A]Ribosomal_S16_1e5el57A1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
Q [auth 8I]Ribosomal_S17_1e5el58I1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
TB [auth 8A]Ribosomal_S17_1e5el58A1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
R [auth 9I]Ribosomal_S18e5el59I1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
UB [auth 9A]Ribosomal_S18e5el59A1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
S [auth AI]Ribosomal_S19e5el5AI1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
VB [auth AA]Ribosomal_S19_1e5el5AA1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19_1ECOD (1.6)
B [auth 1E]Ribosomal_S2e5el51E1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
EB [auth 12]Ribosomal_S2e5el5121 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
WB [auth BA]Ribosomal_S20pe5el5BA1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
T [auth BI]Ribosomal_S20pe5el5BI1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
BA [auth 71]Ribosomal_L1_2nd_1e5el5711 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
CA [auth 11]Ribosomal_L2_1e5el5112 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
CA [auth 11]Ribosomal_L2_Ce5el5111 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
EC [auth 19]Ribosomal_L2_1e5el5192 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
EC [auth 19]Ribosomal_L2_Ce5el5191 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
C [auth 2E]Ribosomal_S3_Ce5el52E1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
C [auth 2E]KH_2_1e5el52E2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
FB [auth 22]Ribosomal_S3_Ce5el5222 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
FB [auth 22]KH_2_1e5el5221 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
DA [auth 21]Ribosomal_L3e5el5211 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
FC [auth 29]Ribosomal_L3e5el5291 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
EA [auth 31]Ribosomal_L4e5el5311 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
GC [auth 39]Ribosomal_L4e5el5391 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
HC [auth 49]Ribosomal_L5_Ce5el5491 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
FA [auth 41]Ribosomal_L5_Ce5el5411 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
GA [auth 51]Ribosomal_L6e5el5511 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
GA [auth 51]Ribosomal_L6_1e5el5512 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
IC [auth 59]Ribosomal_L6_1e5el5591 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
HA [auth 61]Ribosomal_L9_Ne5el5611 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
HA [auth 61]Ribosomal_L9_Ce5el5612 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
JC [auth 69]Ribosomal_L9_Ne5el5691 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
JC [auth 69]Ribosomal_L9_Ce5el5692 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
IA [auth 58]Ribosomal_L13e5el5581 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
KC [auth 15]Ribosomal_L13e5el5151 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
JA [auth 68]Ribosomal_L14e5el5681 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
LC [auth 25]Ribosomal_L14e5el5251 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
MC [auth 35]Ribosomal_L27Ae5el5351 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
KA [auth 78]Ribosomal_L27Ae5el5781 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
LA [auth 88]Ribosomal_L16e5el5881 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
NC [auth 45]Ribosomal_L16e5el5451 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
MA [auth 98]Ribosomal_L17_1e5el5981 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
OC [auth 55]Ribosomal_L17_1e5el5551 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
D [auth 3E]S4e5el53E1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
GB [auth 32]S4e5el5321 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
NA [auth A8]Ribosomal_L18pe5el5A81 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
PC [auth 65]Ribosomal_L18pe5el5651 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
OA [auth B8]Ribosomal_L19e5el5B81 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
QC [auth 75]Ribosomal_L19e5el5751 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
PA [auth C8]Ribosomal_L20e5el5C81 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
RC [auth 85]Ribosomal_L20e5el5851 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
SC [auth 95]Ribosomal_L21pe5el5951 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
QA [auth D8]Ribosomal_L21pe5el5D81 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
TC [auth A5]Ribosomal_L22e5el5A51 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
RA [auth E8]Ribosomal_L22e5el5E81 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
SA [auth F8]Ribosomal_L23_2e5el5F81 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
UC [auth B5]Ribosomal_L23_2e5el5B51 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
TA [auth G8]ribosomal_L24e5el5G81 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
VC [auth C5]ribosomal_L24e5el5C51 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
WC [auth D5]Ribosomal_L25pe5el5D52 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
WC [auth D5]Ribosomal_TL5_C_1e5el5D51 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_C_1ECOD (1.6)
UA [auth H8]Ribosomal_L25pe5el5H81 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
UA [auth H8]Ribosomal_TL5_Ce5el5H82 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
XC [auth E5]Ribosomal_L27e5el5E51 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
VA [auth I8]Ribosomal_L27e5el5I81 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
YC [auth F5]Ribosomal_L28e5el5F51 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
WA [auth J8]Ribosomal_L28e5el5J81 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
HB [auth 42]Ribosomal_S5_Ce5el5422 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
HB [auth 42]Ribosomal_S5e5el5421 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
E [auth 4E]Ribosomal_S5_Ce5el54E1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
E [auth 4E]Ribosomal_S5e5el54E2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
ZC [auth G5]Ribosomal_L29e5el5G51 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
XA [auth K8]Ribosomal_L29e5el5K81 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
YA [auth L8]Ribosomal_L30e5el5L81 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
AD [auth H5]Ribosomal_L30e5el5H51 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
ZA [auth M8]Ribosomal_L31e5el5M81 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
AB [auth N8]Ribosomal_L32pe5el5N81 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
BD [auth J5]Ribosomal_L32pe5el5J51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
BB [auth P8]Ribosomal_L34e5el5P81 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
CD [auth L5]Ribosomal_L34e5el5L51 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
DD [auth M5]Ribosomal_L35pe5el5M51 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
CB [auth Q8]Ribosomal_L35pe5el5Q81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
F [auth 5E]Ribosomal_S6e5el55E1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
IB [auth 52]Ribosomal_S6e5el5521 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
G [auth 6E]Ribosomal_S7_1e5el56E1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
JB [auth 62]Ribosomal_S7e5el5621 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7ECOD (1.6)
H [auth 7E]Ribosomal_S8_Ne5el57E1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
H [auth 7E]Ribosomal_S8_Ce5el57E2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
KB [auth 72]Ribosomal_S8_Ne5el5722 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
KB [auth 72]Ribosomal_S8_Ce5el5721 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
I [auth 8E]Ribosomal_S9e5el58E1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
LB [auth 82]Ribosomal_S9e5el5821 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
K [auth 2I],
NB [auth 2A]
PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
L [auth 3I],
OB [auth 3A]
PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
M [auth 4I],
PB [auth 4A]
PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
O [auth 6I],
RB [auth 6A]
PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
P [auth 7I],
SB [auth 7A]
PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
R [auth 9I],
UB [auth 9A]
PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
S [auth AI],
VB [auth AA]
PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
B [auth 1E],
EB [auth 12]
PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
BA [auth 71]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
CA [auth 11],
EC [auth 19]
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
CA [auth 11],
EC [auth 19]
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
C [auth 2E],
FB [auth 22]
PF07650KH domain (KH_2)KH domain- Domain
C [auth 2E],
FB [auth 22]
PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
DA [auth 21],
FC [auth 29]
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
EA [auth 31],
GC [auth 39]
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
FA [auth 41],
HC [auth 49]
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
FA [auth 41],
HC [auth 49]
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
HA [auth 61],
JC [auth 69]
PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
HA [auth 61],
JC [auth 69]
PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
IA [auth 58],
KC [auth 15]
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
JA [auth 68],
LC [auth 25]
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
KA [auth 78],
MC [auth 35]
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
LA [auth 88],
NC [auth 45]
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
MA [auth 98],
OC [auth 55]
PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
D [auth 3E],
GB [auth 32]
PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
D [auth 3E],
GB [auth 32]
PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
OA [auth B8],
QC [auth 75]
PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
PA [auth C8],
RC [auth 85]
PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
QA [auth D8],
SC [auth 95]
PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
RA [auth E8],
TC [auth A5]
PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
SA [auth F8],
UC [auth B5]
PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
TA [auth G8],
VC [auth C5]
PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
TA [auth G8],
VC [auth C5]
PF00467KOW motif (KOW)KOW motif- Family
UA [auth H8],
WC [auth D5]
PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
UA [auth H8],
WC [auth D5]
PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
WA [auth J8],
YC [auth F5]
PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
E [auth 4E],
HB [auth 42]
PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
E [auth 4E],
HB [auth 42]
PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
XA [auth K8],
ZC [auth G5]
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
AD [auth H5],
YA [auth L8]
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
ZA [auth M8]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
AB [auth N8],
BD [auth J5]
PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
BB [auth P8],
CD [auth L5]
PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
CB [auth Q8],
DD [auth M5]
PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
F [auth 5E],
IB [auth 52]
PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
I [auth 8E],
LB [auth 82]
PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 13],
DB [auth 1G]
16S ribosomal RNA---
J [auth 1I],
MB [auth 1A]
30S ribosomal protein S10
K [auth 2I],
NB [auth 2A]
30S ribosomal protein S11
L [auth 3I],
OB [auth 3A]
30S ribosomal protein S12
M [auth 4I],
PB [auth 4A]
30S ribosomal protein S13
N [auth 5I],
QB [auth 5A]
30S ribosomal protein S14 type Z---
O [auth 6I],
RB [auth 6A]
30S ribosomal protein S15
P [auth 7I],
SB [auth 7A]
30S ribosomal protein S16
Q [auth 8I],
TB [auth 8A]
30S ribosomal protein S17---
R [auth 9I],
UB [auth 9A]
30S ribosomal protein S18
S [auth AI],
VB [auth AA]
30S ribosomal protein S19
B [auth 1E],
EB [auth 12]
30S ribosomal protein S2
T [auth BI],
WB [auth BA]
30S ribosomal protein S20
U [auth 1F],
XB [auth 1B]
30S ribosomal protein Thx -
V [auth 1K]tRNALys---
W [auth 2K],
ZB [auth 2L]
tRNAfMet---
X [auth 3K]tRNALys---
BC [auth 4L],
Y [auth 4K]
mRNA---
CC [auth 14],
Z [auth 1H]
23S ribosomal RNA---
AA [auth 16],
DC [auth 1J]
5S ribosomal RNA---
BA [auth 71]50S ribosomal protein L1
CA [auth 11],
EC [auth 19]
50S ribosomal protein L2
C [auth 2E],
FB [auth 22]
30S ribosomal protein S3
DA [auth 21],
FC [auth 29]
50S ribosomal protein L3
EA [auth 31],
GC [auth 39]
50S ribosomal protein L4
FA [auth 41],
HC [auth 49]
50S ribosomal protein L5
GA [auth 51],
IC [auth 59]
50S ribosomal protein L6---
HA [auth 61],
JC [auth 69]
50S ribosomal protein L9
IA [auth 58],
KC [auth 15]
50S ribosomal protein L13
JA [auth 68],
LC [auth 25]
50S ribosomal protein L14
KA [auth 78],
MC [auth 35]
50S ribosomal protein L15
LA [auth 88],
NC [auth 45]
50S ribosomal protein L16
MA [auth 98],
OC [auth 55]
50S ribosomal protein L17
D [auth 3E],
GB [auth 32]
30S ribosomal protein S4
NA [auth A8],
PC [auth 65]
50S ribosomal protein L18
OA [auth B8],
QC [auth 75]
50S ribosomal protein L19
PA [auth C8],
RC [auth 85]
50S ribosomal protein L20
QA [auth D8],
SC [auth 95]
50S ribosomal protein L21
RA [auth E8],
TC [auth A5]
50S ribosomal protein L22
SA [auth F8],
UC [auth B5]
50S ribosomal protein L23
TA [auth G8],
VC [auth C5]
50S ribosomal protein L24
UA [auth H8],
WC [auth D5]
50S ribosomal protein L25
VA [auth I8],
XC [auth E5]
50S ribosomal protein L27
WA [auth J8],
YC [auth F5]
50S ribosomal protein L28
E [auth 4E],
HB [auth 42]
30S ribosomal protein S5
XA [auth K8],
ZC [auth G5]
50S ribosomal protein L29
AD [auth H5],
YA [auth L8]
50S ribosomal protein L30
ZA [auth M8]50S ribosomal protein L31
AB [auth N8],
BD [auth J5]
50S ribosomal protein L32
BB [auth P8],
CD [auth L5]
50S ribosomal protein L34
CB [auth Q8],
DD [auth M5]
50S ribosomal protein L35
YB [auth 1L]tRNALys---
AC [auth 3L]tRNALys---
F [auth 5E],
IB [auth 52]
30S ribosomal protein S6
G [auth 6E],
JB [auth 62]
30S ribosomal protein S7
H [auth 7E],
KB [auth 72]
30S ribosomal protein S8---
I [auth 8E],
LB [auth 82]
30S ribosomal protein S9

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth 1I],
MB [auth 1A]
IPR001848Small ribosomal subunit protein uS10Family
J [auth 1I],
MB [auth 1A]
IPR027486Small ribosomal subunit protein uS10 domainDomain
J [auth 1I],
MB [auth 1A]
IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
J [auth 1I],
MB [auth 1A]
IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
K [auth 2I],
NB [auth 2A]
IPR001971Small ribosomal subunit protein uS11Family
K [auth 2I],
NB [auth 2A]
IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
K [auth 2I],
NB [auth 2A]
IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
K [auth 2I],
NB [auth 2A]
IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
L [auth 3I],
OB [auth 3A]
IPR006032Small ribosomal subunit protein uS12Family
L [auth 3I],
OB [auth 3A]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
L [auth 3I],
OB [auth 3A]
IPR005679Ribosomal protein uS12, bacterial-typeFamily
M [auth 4I],
PB [auth 4A]
IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
M [auth 4I],
PB [auth 4A]
IPR001892Small ribosomal subunit protein uS13Family
M [auth 4I],
PB [auth 4A]
IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
M [auth 4I],
PB [auth 4A]
IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
M [auth 4I],
PB [auth 4A]
IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
O [auth 6I],
RB [auth 6A]
IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
O [auth 6I],
RB [auth 6A]
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
O [auth 6I],
RB [auth 6A]
IPR000589Small ribosomal subunit protein uS15Family
P [auth 7I],
SB [auth 7A]
IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
P [auth 7I],
SB [auth 7A]
IPR000307Small ribosomal subunit protein bS16Family
R [auth 9I],
UB [auth 9A]
IPR001648Small ribosomal subunit protein bS18Family
R [auth 9I],
UB [auth 9A]
IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
R [auth 9I],
UB [auth 9A]
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
S [auth AI],
VB [auth AA]
IPR002222Small ribosomal subunit protein uS19Family
S [auth AI],
VB [auth AA]
IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
S [auth AI],
VB [auth AA]
IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
S [auth AI],
VB [auth AA]
IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
B [auth 1E],
EB [auth 12]
IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
B [auth 1E],
EB [auth 12]
IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth 1E],
EB [auth 12]
IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth 1E],
EB [auth 12]
IPR001865Small ribosomal subunit protein uS2Family
T [auth BI],
WB [auth BA]
IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
T [auth BI],
WB [auth BA]
IPR002583Small ribosomal subunit protein bS20Family
U [auth 1F],
XB [auth 1B]
IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
U [auth 1F],
XB [auth 1B]
IPR031414Small ribosomal subunit protein bTHXFamily
BA [auth 71]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
BA [auth 71]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
BA [auth 71]IPR005878Large ribosomal subunit protein uL1, bacterial-typeFamily
BA [auth 71]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
BA [auth 71]IPR002143Large ribosomal subunit protein uL1Family
BA [auth 71]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
CA [auth 11],
EC [auth 19]
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
CA [auth 11],
EC [auth 19]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CA [auth 11],
EC [auth 19]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth 11],
EC [auth 19]
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
CA [auth 11],
EC [auth 19]
IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
CA [auth 11],
EC [auth 19]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CA [auth 11],
EC [auth 19]
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
CA [auth 11],
EC [auth 19]
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
CA [auth 11],
EC [auth 19]
IPR002171Large ribosomal subunit protein uL2Family
C [auth 2E],
FB [auth 22]
IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth 2E],
FB [auth 22]
IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
C [auth 2E],
FB [auth 22]
IPR004087K Homology domainDomain
C [auth 2E],
FB [auth 22]
IPR004044K Homology domain, type 2Domain
C [auth 2E],
FB [auth 22]
IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth 2E],
FB [auth 22]
IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth 2E],
FB [auth 22]
IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
C [auth 2E],
FB [auth 22]
IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
DA [auth 21],
FC [auth 29]
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
DA [auth 21],
FC [auth 29]
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
DA [auth 21],
FC [auth 29]
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
DA [auth 21],
FC [auth 29]
IPR000597Large ribosomal subunit protein uL3Family
EA [auth 31],
GC [auth 39]
IPR013005Large ribosomal subunit protein uL4-likeFamily
EA [auth 31],
GC [auth 39]
IPR002136Large ribosomal subunit protein uL4Family
EA [auth 31],
GC [auth 39]
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
FA [auth 41],
HC [auth 49]
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
FA [auth 41],
HC [auth 49]
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
FA [auth 41],
HC [auth 49]
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
FA [auth 41],
HC [auth 49]
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
FA [auth 41],
HC [auth 49]
IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
FA [auth 41],
HC [auth 49]
IPR002132Large ribosomal subunit protein uL5Family
HA [auth 61],
JC [auth 69]
IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
HA [auth 61],
JC [auth 69]
IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
HA [auth 61],
JC [auth 69]
IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
HA [auth 61],
JC [auth 69]
IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
HA [auth 61],
JC [auth 69]
IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
HA [auth 61],
JC [auth 69]
IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
HA [auth 61],
JC [auth 69]
IPR000244Large ribosomal subunit protein bL9Family
IA [auth 58],
KC [auth 15]
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
IA [auth 58],
KC [auth 15]
IPR005822Large ribosomal subunit protein uL13Family
IA [auth 58],
KC [auth 15]
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
IA [auth 58],
KC [auth 15]
IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
JA [auth 68],
LC [auth 25]
IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
JA [auth 68],
LC [auth 25]
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
JA [auth 68],
LC [auth 25]
IPR000218Large ribosomal subunit protein uL14Family
JA [auth 68],
LC [auth 25]
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
KA [auth 78],
MC [auth 35]
IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
KA [auth 78],
MC [auth 35]
IPR021131Large ribosomal subunit protein uL15/eL18Domain
KA [auth 78],
MC [auth 35]
IPR030878Large ribosomal subunit protein uL15Family
KA [auth 78],
MC [auth 35]
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
KA [auth 78],
MC [auth 35]
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
LA [auth 88],
NC [auth 45]
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
LA [auth 88],
NC [auth 45]
IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
LA [auth 88],
NC [auth 45]
IPR016180Large ribosomal subunit protein uL16 domainDomain
LA [auth 88],
NC [auth 45]
IPR047873Large ribosomal subunit protein uL16Family
MA [auth 98],
OC [auth 55]
IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
MA [auth 98],
OC [auth 55]
IPR000456Large ribosomal subunit protein bL17Family
D [auth 3E],
GB [auth 32]
IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
D [auth 3E],
GB [auth 32]
IPR002942RNA-binding S4 domainDomain
D [auth 3E],
GB [auth 32]
IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
D [auth 3E],
GB [auth 32]
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
D [auth 3E],
GB [auth 32]
IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
D [auth 3E],
GB [auth 32]
IPR022801Small ribosomal subunit protein uS4Family
NA [auth A8],
PC [auth 65]
IPR005484Large ribosomal subunit protein uL18Family
NA [auth A8],
PC [auth 65]
IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
OA [auth B8],
QC [auth 75]
IPR001857Large ribosomal subunit protein bL19Family
OA [auth B8],
QC [auth 75]
IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
OA [auth B8],
QC [auth 75]
IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
OA [auth B8],
QC [auth 75]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
PA [auth C8],
RC [auth 85]
IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
PA [auth C8],
RC [auth 85]
IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
PA [auth C8],
RC [auth 85]
IPR005813Large ribosomal subunit protein bL20Family
QA [auth D8],
SC [auth 95]
IPR028909Large ribosomal subunit protein bL21-likeFamily
QA [auth D8],
SC [auth 95]
IPR001787Large ribosomal subunit protein bL21Family
QA [auth D8],
SC [auth 95]
IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
RA [auth E8],
TC [auth A5]
IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
RA [auth E8],
TC [auth A5]
IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
RA [auth E8],
TC [auth A5]
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
RA [auth E8],
TC [auth A5]
IPR001063Large ribosomal subunit protein uL22Family
RA [auth E8],
TC [auth A5]
IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
SA [auth F8],
UC [auth B5]
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
SA [auth F8],
UC [auth B5]
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
SA [auth F8],
UC [auth B5]
IPR013025Large ribosomal subunit protein uL23-likeFamily
TA [auth G8],
VC [auth C5]
IPR003256Large ribosomal subunit protein uL24Family
TA [auth G8],
VC [auth C5]
IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
TA [auth G8],
VC [auth C5]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
TA [auth G8],
VC [auth C5]
IPR005824KOWDomain
TA [auth G8],
VC [auth C5]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
TA [auth G8],
VC [auth C5]
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
UA [auth H8],
WC [auth D5]
IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
UA [auth H8],
WC [auth D5]
IPR001021Ribosomal protein bL25, long-formFamily
UA [auth H8],
WC [auth D5]
IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
UA [auth H8],
WC [auth D5]
IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
UA [auth H8],
WC [auth D5]
IPR020057Large ribosomal subunit protein bL25, beta domainDomain
UA [auth H8],
WC [auth D5]
IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
UA [auth H8],
WC [auth D5]
IPR050070Bacterial ribosomal protein bL25Family
VA [auth I8],
XC [auth E5]
IPR001684Large ribosomal subunit protein bL27Family
VA [auth I8],
XC [auth E5]
IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
WA [auth J8],
YC [auth F5]
IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
WA [auth J8],
YC [auth F5]
IPR050096Bacterial ribosomal protein bL28Family
WA [auth J8],
YC [auth F5]
IPR026569Large ribosomal subunit protein bL28Family
WA [auth J8],
YC [auth F5]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
E [auth 4E],
HB [auth 42]
IPR000851Small ribosomal subunit protein uS5Family
E [auth 4E],
HB [auth 42]
IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth 4E],
HB [auth 42]
IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
E [auth 4E],
HB [auth 42]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth 4E],
HB [auth 42]
IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
E [auth 4E],
HB [auth 42]
IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
E [auth 4E],
HB [auth 42]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
XA [auth K8],
ZC [auth G5]
IPR050063Universal ribosomal protein uL29Family
XA [auth K8],
ZC [auth G5]
IPR001854Large ribosomal subunit protein uL29Family
XA [auth K8],
ZC [auth G5]
IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
XA [auth K8],
ZC [auth G5]
IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
AD [auth H5],
YA [auth L8]
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
AD [auth H5],
YA [auth L8]
IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
AD [auth H5],
YA [auth L8]
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
AD [auth H5],
YA [auth L8]
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
ZA [auth M8]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
ZA [auth M8]IPR027491Large ribosomal subunit protein bL31 type AFamily
ZA [auth M8]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
ZA [auth M8]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AB [auth N8],
BD [auth J5]
IPR002677Large ribosomal subunit protein bL32Family
AB [auth N8],
BD [auth J5]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AB [auth N8],
BD [auth J5]
IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
BB [auth P8],
CD [auth L5]
IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
BB [auth P8],
CD [auth L5]
IPR000271Large ribosomal subunit protein bL34Family
CB [auth Q8],
DD [auth M5]
IPR021137Large ribosomal subunit protein bL35-likeFamily
CB [auth Q8],
DD [auth M5]
IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
CB [auth Q8],
DD [auth M5]
IPR001706Large ribosomal subunit protein bL35Family
CB [auth Q8],
DD [auth M5]
IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
F [auth 5E],
IB [auth 52]
IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
F [auth 5E],
IB [auth 52]
IPR000529Small ribosomal subunit protein bS6Family
F [auth 5E],
IB [auth 52]
IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
F [auth 5E],
IB [auth 52]
IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
F [auth 5E],
IB [auth 52]
IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
G [auth 6E],
JB [auth 62]
IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
G [auth 6E],
JB [auth 62]
IPR000235Small ribosomal subunit protein uS7Family
G [auth 6E],
JB [auth 62]
IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
G [auth 6E],
JB [auth 62]
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
G [auth 6E],
JB [auth 62]
IPR023798Small ribosomal subunit protein uS7 domainDomain
I [auth 8E],
LB [auth 82]
IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
I [auth 8E],
LB [auth 82]
IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
I [auth 8E],
LB [auth 82]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
I [auth 8E],
LB [auth 82]
IPR000754Small ribosomal subunit protein uS9Family
I [auth 8E],
LB [auth 82]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily