Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APRK11194e5hr6A1 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: PRK11194ECOD (1.6)
ARadical_SAMe5hr6A2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Radical_SAMECOD (1.6)
C [auth B]PRK11194e5hr6B2 A: alpha arraysX: HhH/H2THH: SAM/DNA-glycosylaseT: SAM domain-likeF: PRK11194ECOD (1.6)
C [auth B]Radical_SAMe5hr6B1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Radical_SAMECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.150.530 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
A3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
C [auth B]1.10.150.530 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
C [auth B]3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
C [auth B]
PF04055Radical SAM superfamily (Radical_SAM)Radical SAM superfamilyRadical SAM proteins catalyse diverse reactions, including unusual methylations, isomerisation, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation.Domain
A,
C [auth B]
PF21016Ribosomal RNA large subunit methyltransferase N-terminal domain (RlmN_N)Ribosomal RNA large subunit methyltransferase N-terminal domainThis entry represents the N-terminal domain from the dual-specificity RNA methyltransferase RlmN.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
C [auth B]
RlmN methylase
B [auth C],
D
tRNA Glu---

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A,
C [auth B]
SMC Parent Component: CYS

RESIDAA0234

PSI-MOD :  S-methyl-L-cysteine MOD:00239