Annotations: 5OPJ

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	UNK_F_TYPE	e5opjA3	A: beta barrels	X: Glycoside hydrolase family 127 C-terminal domain (From Topology)	H: Glycoside hydrolase family 127 C-terminal domain (From Topology)	T: Glycoside hydrolase family 127 C-terminal domain	F: UNK_F_TYPE	ECOD (1.6)
A	UNK_F_TYPE	e5opjA4	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: UNK_F_TYPE	ECOD (1.6)
A	Glyco_hydro_127_2nd	e5opjA2	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: Glycoside hydrolase family 127 middle domain-related (From Topology)	T: Glycoside hydrolase family 127 middle domain-related	F: Glyco_hydro_127_2nd	ECOD (1.6)
A	Glyco_hydro_127_1st	e5opjA1	A: alpha superhelices	X: Repetitive alpha hairpins	H: alpha/alpha toroid (From Topology)	T: alpha/alpha toroid	F: Glyco_hydro_127_1st	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF16375	Domain of unknown function (DUF4986)	Domain of unknown function	This domain is found in Rhamnogalacturonan lyase from Bacteroides thetaiotaomicron (Swiss:Q8AAW3) and other bacterial proteins. It shows an alpha/beta structure [1] and locates C-terminal to Pfam:PF07944. The specific function of this domain is still ...	This domain is found in Rhamnogalacturonan lyase from Bacteroides thetaiotaomicron (Swiss:Q8AAW3) and other bacterial proteins. It shows an alpha/beta structure [1] and locates C-terminal to Pfam:PF07944. The specific function of this domain is still unknown.	Domain
A	PF07944	Beta-L-arabinofuranosidase, GH127 catalytic domain (Beta-AFase-like_GH127_cat)	Beta-L-arabinofuranosidase, GH127 catalytic domain	-	Repeat
A	PF20736	Beta-L-arabinofuranosidase, GH127 middle domain (Glyco_hydro127M)	Beta-L-arabinofuranosidase, GH127 middle domain	This entry represents the first of two beta sandwich domains found in the beta-L-arabinofuranosidase enzyme, EC:3.2.1.185 [1]. This domain shows a similarity to C-terminal domains of GH44, GH27, and GH39 enzymes [1].	Domain
A	PF20620	Family of unknown function (DUF6805) (DUF6805)	Family of unknown function (DUF6805)	This presumed domain is functionally uncharacterised. This domain family is found in bacteria, and is approximately 130 amino acids in length. The family is found in association with Pfam:PF07944, Pfam:PF16375.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Rhamnogalacturonan lyase	cation binding ion binding binding metal ion binding small molecule binding	carbohydrate metabolic process primary metabolic process metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR049046	Non-reducing end beta-L-arabinofuranosidase-like, GH127 middle domain	Domain
A	IPR008928	Six-hairpin glycosidase superfamily	Homologous Superfamily
A	IPR032275	Domain of unknown function DUF4986	Domain
A	IPR046544	Glycoside hydrolase GH146, substrate-binding domain	Domain
A	IPR012878	Non-reducing end beta-L-arabinofuranosidase-like, GH127 catalytic domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.