5VQ3
Nitrogenase Cp1 at pH 6.5
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Helical backbone metal receptor | 8033236 | 3001679 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Helical backbone metal receptor | 8033236 | 3001679 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Helical backbone metal receptor | 8033238 | 3001679 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Helical backbone metal receptor | 8033238 | 3001679 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Oxidored_nitro_3rd | e5vq3A2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Oxidored_nitro_3rd | ECOD (1.6) |
C | Oxidored_nitro_3rd | e5vq3C1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Oxidored_nitro_3rd | ECOD (1.6) |
B | Oxidored_nitro_3rd | e5vq3B2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Oxidored_nitro_3rd | ECOD (1.6) |
B | Oxidored_nitro_1st | e5vq3B3 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Oxidored_nitro_1st | ECOD (1.6) |
D | Oxidored_nitro_3rd | e5vq3D2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Oxidored_nitro_3rd | ECOD (1.6) |
D | Oxidored_nitro_1st | e5vq3D1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Oxidored_nitro_1st | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.1980 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nitrogenase molybdenum iron protein domain | CATH (utative) |
C | 3.40.50.1980 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nitrogenase molybdenum iron protein domain | CATH (utative) |
B | 3.40.50.1980 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nitrogenase molybdenum iron protein domain | CATH (4.3.0) |
B | 1.20.89.10 | Mainly Alpha | Up-down Bundle | Nitrogenase Molybdenum-iron Protein, subunit B | domain 4 | CATH (4.3.0) |
D | 3.40.50.1980 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nitrogenase molybdenum iron protein domain | CATH (4.3.0) |
D | 1.20.89.10 | Mainly Alpha | Up-down Bundle | Nitrogenase Molybdenum-iron Protein, subunit B | domain 4 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00148 | Nitrogenase component 1 type Oxidoreductase (Oxidored_nitro) | Nitrogenase component 1 type Oxidoreductase | - | Domain | |
PF00148 | Nitrogenase component 1 type Oxidoreductase (Oxidored_nitro) | Nitrogenase component 1 type Oxidoreductase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000510 | Nitrogenase/oxidoreductase, component 1 | Domain | |
IPR005972 | Nitrogenase molybdenum-iron protein alpha chain | Family | |
IPR000318 | Nitrogenase component 1, conserved site | Conserved Site | |
IPR010143 | Nitrogenase component 1, alpha chain | Family | |
IPR000510 | Nitrogenase/oxidoreductase, component 1 | Domain | |
IPR005976 | Nitrogenase molybdenum-iron protein beta chain | Family | |
IPR000318 | Nitrogenase component 1, conserved site | Conserved Site | |
IPR050152 | ChlB/BchB/BchZ | Family |