5Z99

Crystal structure of Sialic acid Binding protein from Haemophilus ducreyi with Neu5Ac

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASBP_bac_5_1ste5z99A2 A: a+b two layersX: Alpha-beta plaitsH: Oligo-peptide binding protein (OPPA) insertion domain (From Topology)T: Oligo-peptide binding protein (OPPA) insertion domainF: SBP_bac_5_1stECOD (1.6)
ASBP_bac_5_3rde5z99A3 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: SBP_bac_5_3rdECOD (1.6)
ASBP_bac_5_2nde5z99A1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: SBP_bac_5_2ndECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00496Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)Bacterial extracellular solute-binding proteins, family 5 MiddleThe borders of this family are based on the PDBSum definitions of the domain edges for Swiss:P06202.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Putative ABC transporter periplasmic binding protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR000914Solute-binding protein family 5 domainDomain
IPR006311Twin-arginine translocation pathway, signal sequenceConserved Site
IPR039424Solute-binding protein family 5Family
IPR030678Peptide/nickel binding protein, MppA-typeFamily