6BMS

Palmitoyltransferase structure

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	UNK_F_TYPE	e6bmsA3	A: alpha bundles	X: Palmitoyltransferase DHHC transmembrane domain (From Topology)	H: Palmitoyltransferase DHHC transmembrane domain (From Topology)	T: Palmitoyltransferase DHHC transmembrane domain	F: UNK_F_TYPE	ECOD (1.6)
A	UNK_F_TYPE	e6bmsA1	A: few secondary structure elements	X: Zinc hairpin stack (From Topology)	H: Zinc hairpin stack (From Topology)	T: Zinc hairpin stack	F: UNK_F_TYPE	ECOD (1.6)
A	UNK_F_TYPE	e6bmsA2	A: extended segments	X: Palmitoyltransferase DHHC C-terminal domain (From Topology)	H: Palmitoyltransferase DHHC C-terminal domain (From Topology)	T: Palmitoyltransferase DHHC C-terminal domain	F: UNK_F_TYPE	ECOD (1.6)
B [auth D]	UNK_F_TYPE	e6bmsD3	A: alpha bundles	X: Palmitoyltransferase DHHC transmembrane domain (From Topology)	H: Palmitoyltransferase DHHC transmembrane domain (From Topology)	T: Palmitoyltransferase DHHC transmembrane domain	F: UNK_F_TYPE	ECOD (1.6)
B [auth D]	UNK_F_TYPE	e6bmsD1	A: few secondary structure elements	X: Zinc hairpin stack (From Topology)	H: Zinc hairpin stack (From Topology)	T: Zinc hairpin stack	F: UNK_F_TYPE	ECOD (1.6)
B [auth D]	UNK_F_TYPE	e6bmsD2	A: extended segments	X: Palmitoyltransferase DHHC C-terminal domain (From Topology)	H: Palmitoyltransferase DHHC C-terminal domain (From Topology)	T: Palmitoyltransferase DHHC C-terminal domain	F: UNK_F_TYPE	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth D]	PF01529	DHHC palmitoyltransferase (DHHC)	DHHC palmitoyltransferase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth D]	Palmitoyltransferase	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding protein-cysteine S-stearoyltransferase activity protein-cysteine S-acyltransferase activity catalytic activity, acting on a protein acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity S-acyltransferase activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding protein-cysteine S-stearoyltransferase activity protein-cysteine S-acyltransferase activity catalytic activity, acting on a protein acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity S-acyltransferase activity catalytic activity protein-cysteine S-palmitoyltransferase activity palmitoyltransferase activity myristoyltransferase activity protein-cysteine S-myristoyltransferase activity	protein localization establishment of protein localization cellular localization protein localization to Golgi apparatus protein targeting establishment of localization localization establishment of protein localization to organelle cellular macromolecule localization macromolecule localization protein localization to organelle cellular process protein targeting to Golgi apparatus localization within membrane protein localization establishment of protein localization cellular localization protein localization to Golgi apparatus protein targeting establishment of localization localization establishment of protein localization to organelle cellular macromolecule localization macromolecule localization protein localization to organelle cellular process protein targeting to Golgi apparatus localization within membrane protein localization to membrane peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine peptidyl-cysteine modification lipoprotein biosynthetic process lipoprotein metabolic process primary metabolic process macromolecule biosynthetic process protein acylation protein lipidation protein palmitoylation biosynthetic process macromolecule modification peptidyl-amino acid modification peptidyl-L-cysteine S-palmitoylation metabolic process protein metabolic process macromolecule metabolic process protein modification process	postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse postsynaptic specialization organelle synapse cell junction asymmetric synapse membrane-bounded organelle Golgi membrane intracellular anatomical structure Golgi apparatus membrane postsynaptic density postsynapse cellular anatomical structure neuron to neuron synapse postsynaptic specialization organelle synapse cell junction asymmetric synapse membrane-bounded organelle Golgi membrane intracellular anatomical structure Golgi apparatus membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle bounding membrane of organelle cytoplasm organelle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth D]	IPR001594	Palmitoyltransferase, DHHC domain	Domain

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B [auth D]	OPM				DHHC palmitoyltransferase

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B [auth D]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B [auth D]	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B [auth D]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	S-acyltransferases	DHHC palmitoyltransferase, P2₁ space group

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.