6CQP
High resolution crystal structure of FtsY-NG domain of E. coli
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SRP/SRP receptor N-terminal domain-like | 8056574 | 3001834 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Simibi-like P-loop NTPases | 8056575 | 3002018 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SRP/SRP receptor N-terminal domain-like | 8056574 | 3001834 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Simibi-like P-loop NTPases | 8056575 | 3002018 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SRP54_N | e6cqpA1 | A: alpha bundles | X: Domain of the SRP/SRP receptor G proteins-like | H: Domain of the SRP/SRP receptor G-proteins (From Topology) | T: Domain of the SRP/SRP receptor G-proteins | F: SRP54_N | ECOD (1.6) |
A | SRP54 | e6cqpA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: SRP54 | ECOD (1.6) |
B | SRP54_N | e6cqpB1 | A: alpha bundles | X: Domain of the SRP/SRP receptor G proteins-like | H: Domain of the SRP/SRP receptor G-proteins (From Topology) | T: Domain of the SRP/SRP receptor G-proteins | F: SRP54_N | ECOD (1.6) |
B | SRP54 | e6cqpB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: SRP54 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00448 | SRP54-type protein, GTPase domain (SRP54) | SRP54-type protein, GTPase domain | This family includes relatives of the G-domain of the SRP54 family of proteins. | Domain | |
PF02881 | SRP54-type protein, helical bundle domain (SRP54_N) | SRP54-type protein, helical bundle domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004390 | Signal-recognition particle receptor FtsY | Family | |
IPR000897 | Signal recognition particle, SRP54 subunit, GTPase domain | Domain | |
IPR036225 | SRP/SRP receptor, N-terminal | Homologous Superfamily | |
IPR042101 | Signal recognition particle SRP54, N-terminal domain superfamily | Homologous Superfamily | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR013822 | Signal recognition particle SRP54, helical bundle | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |