6DD6
Crystal structure of bacterial (6-4) photolyase PhrB from in situ serial Laue diffraction
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FAD_binding_7 | e6dd6A1 | A: alpha complex topology | X: Cryptochrome/photolyase FAD-binding domain-related (From Homology) | H: Cryptochrome/photolyase FAD-binding domain-related | T: Cryptochrome/photolyase FAD-binding domain | F: FAD_binding_7 | ECOD (1.6) |
A | DPRP | e6dd6A2 | A: a/b three-layered sandwiches | X: HUP domain-like | H: HUP domains (From Topology) | T: HUP domains | F: DPRP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
A | 1.25.40.80 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | CATH (4.3.0) | |
A | 1.10.579.10 | Mainly Alpha | Orthogonal Bundle | DNA Cyclobutane Dipyrimidine Photolyase, subunit A | domain 3 | CATH (4.3.0) |
A | 1.10.10.1710 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Deoxyribodipyrimidine photolyase-related | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04244 | Deoxyribodipyrimidine photo-lyase-related protein (DPRP) | Deoxyribodipyrimidine photo-lyase-related protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036134 | Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily | Homologous Superfamily | |
IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold | Homologous Superfamily | |
IPR007357 | Photolyase PhrB-like | Family | |
IPR052551 | UV-induced DNA damage repair photolyase | Family |