Annotations: 6GSZ

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Bac_rhamnosid_N	e6gszA2	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: Bac_rhamnosid_N	ECOD (1.6)
A	Bac_rhamnosid	e6gszA3	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Galactose-binding domain-like	F: Bac_rhamnosid	ECOD (1.6)
A	fn3_6	e6gszA5	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: fn3_6	ECOD (1.6)
A	Bac_rhamnosid_C	e6gszA4	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: Glycoside hydrolase family 127 middle domain-related (From Topology)	T: Glycoside hydrolase family 127 middle domain-related	F: Bac_rhamnosid_C	ECOD (1.6)
A	Bac_rhamnosid6H	e6gszA1	A: alpha superhelices	X: Repetitive alpha hairpins	H: alpha/alpha toroid (From Topology)	T: alpha/alpha toroid	F: Bac_rhamnosid6H	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF05592	Bacterial alpha-L-rhamnosidase concanavalin-like domain (Bac_rhamnosid)	Bacterial alpha-L-rhamnosidase concanavalin-like domain	This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are impo ...	This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria [1].	Domain
A	PF08531	Alpha-L-rhamnosidase N-terminal domain (Bac_rhamnosid_N)	Alpha-L-rhamnosidase N-terminal domain	This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.	Domain
A	PF17389	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain (Bac_rhamnosid6H)	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain	-	Repeat
A	PF17390	Bacterial alpha-L-rhamnosidase C-terminal domain (Bac_rhamnosid_C)	Bacterial alpha-L-rhamnosidase C-terminal domain	This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are impo ...	This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Alpha-L-rhamnosidase	hydrolase activity, acting on glycosyl bonds alpha-L-rhamnosidase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	carbohydrate metabolic process primary metabolic process metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR012341	Six-hairpin glycosidase-like superfamily	Homologous Superfamily
A	IPR016007	Alpha-L-rhamnosidase	Family
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR035398	Alpha-L-rhamnosidase C-terminal domain	Domain
A	IPR035396	Alpha-L-rhamnosidase, six-hairpin glycosidase domain	Domain
A	IPR008928	Six-hairpin glycosidase superfamily	Homologous Superfamily
A	IPR013737	Bacterial alpha-L-rhamnosidase N-terminal	Domain
A	IPR008902	Alpha-L-rhamnosidase, concanavalin-like domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.