6PQ1
Structure of the Fremyella diplosiphon OCP1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6pq1a1 | All alpha proteins | Orange carotenoid protein, N-terminal domain | Orange carotenoid protein, N-terminal domain | automated matches | automated matches | (Tolypothrix sp. PCC 7601 ) [TaxId: 1188 ], | SCOPe (2.08) |
A | d6pq1a2 | Alpha and beta proteins (a+b) | Cystatin-like | NTF2-like | automated matches | automated matches | (Tolypothrix sp. PCC 7601 ) [TaxId: 1188 ], | SCOPe (2.08) |
A | d6pq1a3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Tolypothrix sp. PCC 7601 ) [TaxId: 1188 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Carot_N | e6pq1A2 | A: alpha arrays | X: Orange carotenoid protein, N-terminal domain (From Topology) | H: Orange carotenoid protein, N-terminal domain (From Topology) | T: Orange carotenoid protein, N-terminal domain | F: Carot_N | ECOD (1.6) |
A | SnoaL_5 | e6pq1A1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: SnoaL_5 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.2090.10 | Mainly Alpha | Orthogonal Bundle | orange carotenoid protein, domain 2 | Orange carotenoid-binding protein, N-terminal domain | CATH (utative) |
A | 3.10.450.50 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09150 | Orange carotenoid protein, N-terminal (Carot_N) | Orange carotenoid protein, N-terminal | Members of this family adopt an alpha-helical structure consisting of two four-helix bundles. They are predominantly found in prokaryotic orange carotenoid protein, and carotenoid binding proteins [1]. | Domain | |
PF02136 | Nuclear transport factor 2 (NTF2) domain (NTF2) | Nuclear transport factor 2 (NTF2) domain | This family includes the NTF2-like Delta-5-3-ketosteroid isomerase proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Orange carotenoid-binding protein |
|
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015233 | Orange carotenoid-binding protein, N-terminal | Domain | |
IPR032710 | NTF2-like domain superfamily | Homologous Superfamily | |
IPR002075 | Nuclear transport factor 2 domain | Domain | |
IPR036917 | Orange carotenoid-binding protein, N-terminal domain superfamily | Homologous Superfamily |