Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyRibosome inactivating proteins (RIP) 8099972 3001164 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyBacterial enterotoxins 8097164 3000434 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyBacterial enterotoxins 8097164 3000434 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyBacterial enterotoxins 8097164 3000434 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyBacterial enterotoxins 8097164 3000434 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyBacterial enterotoxins 8097164 3000434 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARIPe7vheA1 A: a+b two layersX: RIP/Polo-box domainH: Ribosome inactivating proteins (RIP) (From Topology)T: Ribosome inactivating proteins (RIP)F: RIPECOD (1.6)
BSLT_betae7vheB1 A: beta barrelsX: OB-foldH: Bacterial enterotoxins (From Topology)T: Bacterial enterotoxinsF: SLT_betaECOD (1.6)
CSLT_betae7vheC1 A: beta barrelsX: OB-foldH: Bacterial enterotoxins (From Topology)T: Bacterial enterotoxinsF: SLT_betaECOD (1.6)
DSLT_betae7vheD1 A: beta barrelsX: OB-foldH: Bacterial enterotoxins (From Topology)T: Bacterial enterotoxinsF: SLT_betaECOD (1.6)
ESLT_betae7vheE1 A: beta barrelsX: OB-foldH: Bacterial enterotoxins (From Topology)T: Bacterial enterotoxinsF: SLT_betaECOD (1.6)
FSLT_betae7vheF1 A: beta barrelsX: OB-foldH: Bacterial enterotoxins (From Topology)T: Bacterial enterotoxinsF: SLT_betaECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00161Ribosome inactivating protein (RIP)Ribosome inactivating protein- Domain
B, C, D, E, F
PF02258Shiga-like toxin beta subunit (SLT_beta)Shiga-like toxin beta subunitThis family represents the B subunit of shiga-like toxin (SLT or verotoxin) produced by some strains of E.coli associated with hemorrhagic colitis and hemolytic uremic syndrome. SLT's are composed of one enzymatic A subunit and five cell binding B s ...This family represents the B subunit of shiga-like toxin (SLT or verotoxin) produced by some strains of E.coli associated with hemorrhagic colitis and hemolytic uremic syndrome. SLT's are composed of one enzymatic A subunit and five cell binding B subunits.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
rRNA N-glycosylase -
B, C, D, E, F
Shiga toxin 2 B subunit-
RRRA peptide---

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
NH2 RESIDAA0081 , AA0083 , AA0084 , AA0086 , AA0087 , AA0088 , AA0090 , AA0091 , AA0092 , AA0093 , AA0095 , AA0096 , AA0097 , AA0098 , AA0099 , AA0100

PSI-MOD :  L-alanine amide MOD:00090 , L-asparagine amide MOD:00092 , L-aspartic acid 1-amide MOD:00093 , L-glutamine amide MOD:00095 , L-glutamic acid 1-amide MOD:00096 , glycine amide MOD:00097 , L-isoleucine amide MOD:00099 , L-leucine amide MOD:00100 , L-lysine amide MOD:00101 , L-methionine amide MOD:00102 , L-proline amide MOD:00104 , L-serine amide MOD:00105 , L-threonine amide MOD:00106 , L-tryptophan amide MOD:00107 , L-tyrosine amide MOD:00108 , L-valine amide MOD:00109