2CB4

Crystal structure of the catalytic domain of the mosquitocidal toxin from Bacillus sphaericus, mutant E197Q


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
14.30.1 M NA ACETATE (PH 4.3), 4-10% (W/V) PEG 4000
Crystal Properties
Matthews coefficientSolvent content
2.7554.99

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 123.71α = 90
b = 143.267β = 100.58
c = 135.814γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCHMMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSLS BEAMLINE X06SASLSX06SA

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.55099.80.0715.43.931659538
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.52.5599.90.354.13.9

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT2.55016053080350.17540.17440.17440.19380.1754
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
t_dihedral_angle_d16.4
t_it1.9
t_angle_deg1.3
t_nbd0.087
t_bond_d0.013
t_gen_planes0.013
t_trig_c_planes0.008
t_incorr_chiral_ct
t_pseud_angle
t_omega_torsion
RMS Deviations
KeyRefinement Restraint Deviation
t_dihedral_angle_d16.4
t_it1.9
t_angle_deg1.3
t_nbd0.087
t_bond_d0.013
t_gen_planes0.013
t_trig_c_planes0.008
t_incorr_chiral_ct
t_pseud_angle
t_omega_torsion
t_other_torsion
t_improper_torsion
t_chiral_improper_torsion
t_sum_occupancies
t_utility_distance
t_utility_angle
t_utility_torsion
t_ideal_dist_contact
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms29330
Nucleic Acid Atoms
Solvent Atoms1350
Heterogen Atoms

Software

Software
Software NamePurpose
TNTrefinement
XDSdata reduction
XSCALEdata scaling