X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP7293.152.0M ammonium sulfate, 0.1M Tris-HCl pH 7, 3% isopropanol
Crystal Properties
Matthews coefficientSolvent content
2.8857.4

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 138.644α = 90
b = 138.644β = 90
c = 266.586γ = 90
Symmetry
Space GroupP 4 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 315r2013-11-22MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 24-ID-E0.97920APS24-ID-E

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.65099.30.1937.84.380508
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.62.6999.61.654.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT2.65076047401699.230.224850.22190.28048RANDOM23.847
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.920.92-1.84
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg40.708
r_dihedral_angle_4_deg14.357
r_dihedral_angle_3_deg12.941
r_dihedral_angle_1_deg5.761
r_long_range_B_refined4.15
r_long_range_B_other4.138
r_scangle_other1.759
r_mcangle_it1.7
r_mcangle_other1.7
r_angle_refined_deg1.39
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg40.708
r_dihedral_angle_4_deg14.357
r_dihedral_angle_3_deg12.941
r_dihedral_angle_1_deg5.761
r_long_range_B_refined4.15
r_long_range_B_other4.138
r_scangle_other1.759
r_mcangle_it1.7
r_mcangle_other1.7
r_angle_refined_deg1.39
r_scbond_it1.107
r_scbond_other1.102
r_mcbond_it1.007
r_mcbond_other1.007
r_angle_other_deg0.763
r_chiral_restr0.071
r_bond_refined_d0.009
r_gen_planes_refined0.005
r_bond_other_d0.001
r_gen_planes_other0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms15219
Nucleic Acid Atoms
Solvent Atoms236
Heterogen Atoms400

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data scaling
HKL-2000data reduction