UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE
UMP is a Ligand Of Interest in 1KZJ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1KZJ_UMP_A_300 | 87% | 3% | 0.105 | 0.979 | 3.26 | 2.97 | 4 | 10 | 0 | 0 | 100% | 1 |
1KZJ_UMP_C_304 | 76% | 3% | 0.123 | 0.96 | 3.28 | 2.8 | 5 | 11 | 1 | 0 | 100% | 1 |
1KZJ_UMP_D_306 | 72% | 4% | 0.138 | 0.962 | 2.84 | 2.91 | 4 | 9 | 1 | 0 | 100% | 1 |
1KZJ_UMP_F_310 | 69% | 3% | 0.138 | 0.953 | 3.57 | 2.74 | 4 | 12 | 2 | 0 | 100% | 1 |
1KZJ_UMP_E_308 | 66% | 3% | 0.147 | 0.954 | 3.28 | 2.63 | 5 | 9 | 1 | 0 | 100% | 1 |
1KZJ_UMP_B_302 | 60% | 2% | 0.163 | 0.95 | 3.39 | 3.16 | 6 | 11 | 1 | 0 | 100% | 1 |
1JTU_UMP_A_565 | 90% | 8% | 0.096 | 0.98 | 2.68 | 1.99 | 6 | 9 | 0 | 0 | 100% | 1 |
1JTQ_UMP_A_565 | 86% | 8% | 0.111 | 0.979 | 2.57 | 2.1 | 5 | 10 | 0 | 0 | 100% | 1 |
6CDZ_UMP_A_702 | 82% | 38% | 0.119 | 0.974 | 0.8 | 1.59 | - | 5 | 0 | 0 | 100% | 1 |
4ISK_UMP_C_301 | 82% | 35% | 0.114 | 0.968 | 1.05 | 1.52 | - | 6 | 2 | 0 | 100% | 1 |
1JUT_UMP_A_302 | 69% | 2% | 0.14 | 0.954 | 3.55 | 2.96 | 5 | 12 | 1 | 0 | 100% | 1 |
3TPY_UMP_A_154 | 100% | 40% | 0.041 | 0.993 | 0.89 | 1.44 | 1 | 5 | 0 | 0 | 100% | 0.3 |
3TQ4_UMP_A_777 | 100% | 32% | 0.038 | 0.99 | 1.04 | 1.65 | 1 | 8 | 0 | 0 | 100% | 0.8 |
3TQ5_UMP_A_777 | 100% | 22% | 0.046 | 0.989 | 1.35 | 1.9 | 3 | 6 | 0 | 0 | 100% | 1 |
3TQ3_UMP_A_777 | 100% | 38% | 0.049 | 0.99 | 0.91 | 1.5 | 1 | 5 | 0 | 0 | 100% | 0.3 |
3TRN_UMP_A_777 | 99% | 30% | 0.047 | 0.987 | 1.2 | 1.58 | 2 | 6 | 0 | 0 | 100% | 1 |