NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NAP is a Ligand Of Interest in 1LY3 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1LY3_NAP_A_207 | 86% | 2% | 0.088 | 0.955 | 3.27 | 3.24 | 20 | 25 | 4 | 0 | 100% | 1 |
1LY4_NAP_A_207 | 68% | 2% | 0.125 | 0.937 | 3.46 | 3.21 | 21 | 27 | 10 | 0 | 100% | 1 |
1S3Y_NAP_A_207 | 23% | 1% | 0.243 | 0.864 | 4.91 | 2.67 | 27 | 26 | 4 | 0 | 100% | 0.3333 |
2DBQ_NAP_A_401 | 100% | 24% | 0.017 | 0.998 | 1.42 | 1.71 | 7 | 16 | 0 | 0 | 100% | 1 |
2EXX_NAP_A_3698 | 100% | 10% | 0.025 | 0.996 | 1.63 | 2.7 | 7 | 18 | 9 | 0 | 100% | 1 |
2X9G_NAP_B_1269 | 100% | 46% | 0.031 | 0.997 | 0.96 | 1.14 | 1 | 5 | 0 | 0 | 100% | 1 |
2J8T_NAP_A_1316 | 100% | 49% | 0.033 | 0.996 | 0.97 | 1.01 | 3 | 2 | 1 | 0 | 100% | 1 |
3LQL_NAP_A_500 | 100% | 43% | 0.035 | 0.996 | 1.13 | 1.07 | 3 | 4 | 1 | 0 | 100% | 1 |