1YYM
NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 1YYM designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1YYM_NAG_G_762 | 68% | 68% | 0.145 | 0.956 | 0.46 | 0.75 | - | 1 | 3 | 0 | 100% | 0.9333 |
1YYM_NAG_P_1762 | 58% | 67% | 0.129 | 0.906 | 0.47 | 0.79 | - | - | 2 | 0 | 100% | 0.9333 |
1YYM_NAG_G_789 | 51% | 70% | 0.139 | 0.892 | 0.49 | 0.66 | - | - | 1 | 0 | 100% | 0.9333 |
1YYM_NAG_G_795 | 49% | 69% | 0.145 | 0.893 | 0.53 | 0.66 | - | 1 | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_P_1588 | 46% | 68% | 0.141 | 0.875 | 0.58 | 0.65 | - | - | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_G_776 | 34% | 69% | 0.174 | 0.855 | 0.45 | 0.75 | - | 1 | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_P_1789 | 25% | 64% | 0.186 | 0.821 | 0.56 | 0.81 | - | 1 | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_G_588 | 22% | 67% | 0.224 | 0.843 | 0.57 | 0.7 | - | - | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_G_886 | 19% | 57% | 0.192 | 0.784 | 0.72 | 0.91 | - | 1 | 2 | 0 | 100% | 0.9333 |
1YYM_NAG_P_1886 | 17% | 65% | 0.195 | 0.77 | 0.52 | 0.81 | - | 1 | 3 | 0 | 100% | 0.9333 |
1YYM_NAG_P_1795 | 16% | 66% | 0.189 | 0.757 | 0.56 | 0.76 | - | 1 | 1 | 0 | 100% | 0.9333 |
1YYM_NAG_G_734 | 5% | 69% | 0.315 | 0.727 | 0.58 | 0.61 | - | - | 0 | 1 | 100% | 0.9333 |
1YYM_NAG_P_1776 | 4% | 66% | 0.251 | 0.635 | 0.66 | 0.64 | - | - | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_P_1734 | 3% | 73% | 0.292 | 0.646 | 0.49 | 0.56 | - | - | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_G_741 | 3% | 65% | 0.363 | 0.707 | 0.56 | 0.77 | - | 1 | 0 | 0 | 100% | 0.9333 |
1YYM_NAG_P_1741 | 2% | 68% | 0.332 | 0.627 | 0.62 | 0.61 | - | - | 1 | 0 | 100% | 0.9333 |
2I5Y_NAG_G_762 | 83% | 69% | 0.099 | 0.957 | 0.47 | 0.7 | - | - | 1 | 0 | 100% | 0.9333 |
1RZK_NAG_G_762 | 77% | 65% | 0.115 | 0.956 | 0.62 | 0.73 | - | 1 | 0 | 0 | 100% | 0.9333 |
1YYL_NAG_G_762 | 69% | 68% | 0.127 | 0.94 | 0.54 | 0.7 | - | - | 1 | 0 | 100% | 0.9333 |
2I60_NAG_G_789 | 67% | 69% | 0.109 | 0.918 | 0.45 | 0.72 | - | - | 0 | 0 | 100% | 0.9333 |
5UKR_NAG_G_402 | 36% | 73% | 0.217 | 0.909 | 0.32 | 0.73 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.83 | 0.93 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |