UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 2BVM designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2BVM_UDP_A_1543 | 97% | 25% | 0.072 | 0.985 | 1.28 | 1.77 | 1 | 7 | 0 | 0 | 100% | 1 |
| 2BVL_UDP_A_1545 | 98% | 19% | 0.062 | 0.982 | 1.63 | 1.82 | 3 | 8 | 0 | 0 | 100% | 1 |
| 7LOU_UDP_B_611 | 92% | 37% | 0.095 | 0.986 | 1 | 1.46 | - | 6 | 0 | 0 | 100% | 1 |
| 7LOV_UDP_B_602 | 84% | 33% | 0.117 | 0.979 | 1.08 | 1.57 | 3 | 7 | 0 | 0 | 100% | 1 |
| 7S0Y_UDP_A_602 | 67% | 31% | 0.174 | 0.984 | 1.09 | 1.65 | 1 | 7 | 0 | 0 | 100% | 1 |
| 8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
| 8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 100% | 37% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
