RP5: 5-O-phosphono-beta-D-ribofuranose
RP5 is a Ligand Of Interest in 2NX1 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2NX1_RP5_A_1269 | 90% | 10% | 0.079 | 0.962 | 2.17 | 2.21 | 3 | 7 | 0 | 0 | 100% | 1 |
2NX1_RP5_B_2269 | 89% | 21% | 0.082 | 0.96 | 2.31 | 1.02 | 4 | 1 | 0 | 0 | 100% | 1 |
3M7I_RP5_A_801 | 84% | 28% | 0.101 | 0.963 | 1.28 | 1.61 | 2 | 5 | 1 | 0 | 100% | 1 |
7XEY_RP5_A_702 | 83% | 53% | 0.121 | 0.992 | 0.71 | 1.08 | - | 2 | 0 | 0 | 93% | 0.9286 |
1QVJ_RP5_A_554 | 70% | 6% | 0.131 | 0.948 | 2.97 | 2.16 | 6 | 7 | 0 | 1 | 100% | 1 |
3UPT_RP5_A_693 | 59% | 40% | 0.148 | 0.929 | 0.77 | 1.55 | - | 4 | 0 | 0 | 100% | 0.75 |
8K06_RP5_B_401 | 46% | 21% | 0.169 | 0.905 | 1.54 | 1.78 | 3 | 4 | 0 | 0 | 100% | 1 |