NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NDP is a Ligand Of Interest in 2YHU designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2YHU_NDP_A_301 | 81% | 18% | 0.101 | 0.953 | 1.59 | 1.92 | 7 | 8 | 2 | 0 | 100% | 1 |
2YHU_NDP_B_301 | 80% | 20% | 0.102 | 0.951 | 1.59 | 1.81 | 5 | 9 | 1 | 0 | 100% | 1 |
2YHU_NDP_D_301 | 80% | 19% | 0.109 | 0.958 | 1.57 | 1.85 | 5 | 6 | 0 | 0 | 100% | 1 |
2YHU_NDP_C_301 | 57% | 20% | 0.141 | 0.917 | 1.52 | 1.85 | 6 | 7 | 0 | 0 | 100% | 1 |
8OF2_NDP_A_302 | 97% | 52% | 0.066 | 0.98 | 0.8 | 1.05 | 1 | 4 | 1 | 0 | 100% | 0.9 |
1US0_NDP_A_318 | 100% | 45% | 0.027 | 0.998 | 1.21 | 0.91 | 3 | - | 4 | 0 | 100% | 1 |
2I16_NDP_A_319 | 100% | 46% | 0.028 | 0.998 | 1.2 | 0.9 | 3 | 1 | 0 | 0 | 100% | 1 |
2I17_NDP_A_319 | 100% | 46% | 0.029 | 0.998 | 1.22 | 0.89 | 3 | - | 0 | 0 | 100% | 1 |
2PF8_NDP_A_318 | 100% | 46% | 0.031 | 0.998 | 1.17 | 0.93 | 3 | - | 4 | 0 | 100% | 1 |
2PFH_NDP_A_318 | 100% | 26% | 0.03 | 0.998 | 1.79 | 1.2 | 8 | 7 | 4 | 0 | 100% | 1 |