2YMD
SRO: SEROTONIN
SRO is a Ligand Of Interest in 2YMD designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
2YMD_SRO_C_1213 | 90% | 58% | 0.082 | 0.965 | 0.88 | 0.75 | - | - | 1 | 0 | 100% | 1 |
2YMD_SRO_D_1214 | 90% | 52% | 0.075 | 0.956 | 0.94 | 0.93 | - | - | 1 | 0 | 100% | 1 |
2YMD_SRO_B_1212 | 82% | 53% | 0.095 | 0.95 | 0.99 | 0.83 | - | - | 1 | 0 | 100% | 1 |
2YMD_SRO_J_1213 | 81% | 57% | 0.091 | 0.941 | 0.91 | 0.74 | - | - | 1 | 0 | 100% | 1 |
2YMD_SRO_F_1214 | 80% | 62% | 0.095 | 0.945 | 0.93 | 0.53 | - | - | 1 | 0 | 100% | 1 |
2YMD_SRO_A_1213 | 77% | 49% | 0.101 | 0.94 | 0.98 | 1 | - | 1 | 1 | 0 | 100% | 1 |
2YMD_SRO_I_1213 | 73% | 58% | 0.11 | 0.938 | 0.96 | 0.65 | - | - | 0 | 0 | 100% | 1 |
2YMD_SRO_H_1206 | 70% | 53% | 0.129 | 0.947 | 0.95 | 0.89 | - | 1 | 1 | 0 | 100% | 1 |
2YMD_SRO_E_1213 | 64% | 60% | 0.11 | 0.908 | 0.96 | 0.58 | - | - | 0 | 0 | 100% | 1 |
2YMD_SRO_G_1213 | 56% | 55% | 0.144 | 0.916 | 0.97 | 0.76 | - | - | 1 | 0 | 100% | 1 |
2QEH_SRO_A_145 | 99% | 16% | 0.046 | 0.978 | 2.2 | 1.54 | 2 | 2 | 0 | 0 | 100% | 1 |
5MAM_SRO_O_101 | 91% | 33% | 0.064 | 0.951 | 1.14 | 1.51 | 1 | 1 | 0 | 0 | 100% | 1 |
8GDL_SRO_A_401 | 91% | 41% | 0.076 | 0.961 | 0.87 | 1.43 | - | 3 | 0 | 0 | 100% | 1 |
3BRN_SRO_A_158 | 89% | 17% | 0.103 | 0.982 | 2.09 | 1.56 | 2 | 2 | 0 | 0 | 100% | 1 |
5MT9_SRO_W_101 | 88% | 34% | 0.087 | 0.964 | 1.39 | 1.23 | 2 | 1 | 0 | 0 | 100% | 1 |