TYD: THYMIDINE-5'-DIPHOSPHATE

TYD is a Ligand Of Interest in 3FBC designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3FBC_TYD_D_138 28% 31% 0.245 0.8971.09 1.63 1 310100%1
3FBC_TYD_A_138 26% 34% 0.236 0.880.98 1.63 1 100100%1
3FBC_TYD_C_138 21% 31% 0.32 0.9291.05 1.68 1 200100%1
3FBC_TYD_F_138 14% 31% 0.325 0.8831.04 1.68 1 210100%1
3FBC_TYD_B_138 9% 31% 0.365 0.8531.05 1.67 1 310100%1
3FBC_TYD_E_138 5% 33% 0.42 0.8411.02 1.61 1 200100%1
3FBF_TYD_A_138 83% 31% 0.11 0.970.99 1.72 1 330100%1
3EVW_TYD_D_138 76% 30% 0.13 0.9670.97 1.81 1 610100%1
2B8Q_TYD_C_162 67% 22% 0.147 0.9561.26 1.94 1 720100%1
3OTI_TYD_B_377 99% 22% 0.054 0.9871.12 2.08 1 200100%1
3EVO_TYD_A_160 99% 32% 0.057 0.9881 1.68 1 300100%1
5WXK_TYD_A_401 99% 33% 0.06 0.9870.99 1.64 1 200100%1
3EM1_TYD_B_143 98% 31% 0.059 0.9841.01 1.71 1 300100%1
3RSC_TYD_A_397 98% 39% 0.055 0.9770.74 1.61 1 300100%1