API: 2,6-DIAMINOPIMELIC ACID
API is a Ligand Of Interest in 3VDF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3VDF_API_A_711 | 22% | 26% | 0.253 | 0.872 | 1.08 | 1.89 | 1 | 3 | 1 | 0 | 100% | 0.8 |
| 2DAP_API_A_902 | 99% | 7% | 0.052 | 0.983 | 2.2 | 2.59 | 6 | 6 | 1 | 0 | 100% | 1 |
| 4G88_API_A_401 | 89% | 29% | 0.082 | 0.96 | 1.42 | 1.44 | 2 | 4 | 0 | 0 | 100% | 1 |
| 5M47_API_A_301 | 83% | 31% | 0.118 | 0.977 | 1.01 | 1.72 | 1 | 5 | 1 | 0 | 100% | 1 |
| 3TD4_API_B_401 | 77% | 31% | 0.116 | 0.955 | 1.29 | 1.43 | 2 | 2 | 1 | 0 | 100% | 1 |
| 5LKW_API_A_201 | 69% | 28% | 0.099 | 0.969 | 0.68 | 2.15 | - | 4 | 1 | 0 | 69% | 0.6923 |
