GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 4M0L designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4M0L_GDP_B_501 84% 47% 0.109 0.9710.93 1.11 1 210100%0.73
4M0L_GDP_D_501 84% 46% 0.112 0.9740.99 1.11 1 200100%0.74
4M0L_GDP_C_501 79% 46% 0.122 0.9670.99 1.1 1 210100%0.76
4M0L_GDP_A_501 78% 44% 0.123 0.9650.96 1.18 1 230100%0.76
4M0L_GDP_F_501 72% 46% 0.133 0.9570.96 1.12 1 200100%0.79
4M0L_GDP_E_501 68% 46% 0.135 0.9460.95 1.12 1 100100%0.78
4RD0_GDP_A_501 97% 47% 0.065 0.9810.86 1.18 - 400100%1
4RD1_GDP_A_502 95% 45% 0.075 0.9780.92 1.2 1 300100%17
6I5M_GDP_A_501 95% 46% 0.088 0.9910.79 1.28 1 400100%1
4RD3_GDP_A_502 92% 45% 0.084 0.9750.88 1.24 1 500100%1
4M4S_GDP_A_530 91% 46% 0.099 0.9850.97 1.12 1 220100%0.9557
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1
2CXX_GDP_B_2401 100% 29% 0.031 0.9891.26 1.57 1 300100%1
4LUC_GDP_A_204 100% 40% 0.036 0.9921.22 1.11 2 200100%1
5YMX_GDP_A_301 100% 54% 0.038 0.9940.92 0.85 1 -20100%1
5KY2_GDP_A_403 100% 48% 0.036 0.9890.98 1.04 1 100100%1