RET: RETINAL
RET is a Ligand Of Interest in 4QRY designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4QRY_RET_A_301 | 78% | 15% | 0.126 | 0.968 | 2.22 | 1.6 | 6 | 7 | 1 | 0 | 100% | 0.4762 |
4QRY_RET_E_305 | 73% | 13% | 0.134 | 0.961 | 2.34 | 1.68 | 6 | 7 | 0 | 0 | 100% | 0.4762 |
4QRY_RET_F_305 | 70% | 13% | 0.138 | 0.957 | 2.27 | 1.7 | 6 | 7 | 1 | 0 | 100% | 0.3333 |
4QRY_RET_B_302 | 65% | 19% | 0.136 | 0.937 | 1.62 | 1.83 | 5 | 9 | 2 | 0 | 100% | 0.619 |
4QRY_RET_C_301 | 61% | 18% | 0.134 | 0.921 | 1.78 | 1.77 | 5 | 10 | 0 | 0 | 100% | 0.4762 |
4QRY_RET_G_302 | 56% | 13% | 0.133 | 0.904 | 2.29 | 1.73 | 6 | 6 | 1 | 0 | 100% | 0.4762 |
3QBG_RET_B_292 | 86% | 13% | 0.084 | 0.952 | 2.25 | 1.7 | 6 | 6 | 1 | 0 | 100% | 0.9524 |
5B0W_RET_B_301 | 82% | 16% | 0.103 | 0.958 | 2.16 | 1.56 | 6 | 7 | 5 | 0 | 100% | 0.3619 |
3QBK_RET_B_292 | 80% | 15% | 0.113 | 0.963 | 2.28 | 1.55 | 5 | 5 | 0 | 0 | 100% | 0.9524 |
3A7K_RET_B_292 | 80% | 14% | 0.115 | 0.963 | 2.23 | 1.69 | 5 | 5 | 0 | 0 | 100% | 0.9524 |
5ETZ_RET_B_301 | 79% | 14% | 0.102 | 0.949 | 2.18 | 1.68 | 6 | 7 | 1 | 0 | 100% | 0.9524 |
3UTY_RET_A_301 | 100% | 5% | 0.028 | 0.992 | 2.48 | 2.7 | 6 | 12 | 2 | 0 | 100% | 0.9524 |
3UTX_RET_B_301 | 100% | 6% | 0.042 | 0.988 | 2.42 | 2.7 | 5 | 12 | 4 | 0 | 100% | 0.9524 |
7XJE_RET_A_301 | 99% | 6% | 0.048 | 0.983 | 1.99 | 2.98 | 4 | 14 | 1 | 0 | 100% | 0.9524 |
5G28_RET_A_1268 | 97% | 23% | 0.051 | 0.968 | 1.29 | 1.84 | 3 | 5 | 0 | 0 | 100% | 0.9524 |
7XJC_RET_A_301 | 97% | 10% | 0.067 | 0.98 | 1.93 | 2.43 | 2 | 14 | 0 | 0 | 100% | 0.7752 |