5AQD
PEB: PHYCOERYTHROBILIN
PEB is a Ligand Of Interest in 5AQD designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
5AQD_PEB_H_167 | 89% | 5% | 0.079 | 0.958 | 3.32 | 2.04 | 11 | 14 | 0 | 0 | 100% | 1 |
5AQD_PEB_M_188 | 89% | 5% | 0.084 | 0.962 | 3.49 | 2.03 | 12 | 15 | 1 | 0 | 100% | 1 |
5AQD_PEB_E_167 | 85% | 5% | 0.089 | 0.953 | 3.39 | 1.97 | 11 | 14 | 2 | 0 | 100% | 1 |
5AQD_PEB_J_166 | 84% | 3% | 0.092 | 0.952 | 3.5 | 2.46 | 10 | 18 | 0 | 0 | 100% | 1 |
5AQD_PEB_B_166 | 84% | 4% | 0.093 | 0.953 | 3.38 | 2.41 | 10 | 18 | 1 | 0 | 100% | 1 |
5AQD_PEB_L_166 | 83% | 4% | 0.094 | 0.953 | 3.31 | 2.46 | 9 | 17 | 1 | 0 | 100% | 1 |
5AQD_PEB_G_167 | 81% | 5% | 0.094 | 0.947 | 3.43 | 1.94 | 13 | 14 | 1 | 0 | 100% | 1 |
5AQD_PEB_D_166 | 81% | 4% | 0.092 | 0.944 | 3.41 | 2.4 | 10 | 19 | 1 | 0 | 100% | 1 |
5AQD_PEB_V_188 | 81% | 5% | 0.09 | 0.94 | 3.44 | 2.04 | 11 | 16 | 1 | 0 | 100% | 1 |
5AQD_PEB_F_167 | 80% | 5% | 0.097 | 0.946 | 3.51 | 1.85 | 10 | 13 | 0 | 0 | 100% | 1 |
5AQD_PEB_X_188 | 80% | 5% | 0.097 | 0.945 | 3.51 | 1.98 | 10 | 17 | 1 | 0 | 100% | 1 |
5AQD_PEB_A_166 | 79% | 3% | 0.102 | 0.949 | 3.41 | 2.57 | 9 | 20 | 2 | 0 | 100% | 1 |
5AQD_PEB_U_188 | 79% | 5% | 0.096 | 0.942 | 3.42 | 1.95 | 9 | 17 | 2 | 0 | 100% | 1 |
5AQD_PEB_G_166 | 79% | 4% | 0.097 | 0.943 | 3.2 | 2.36 | 10 | 16 | 0 | 0 | 100% | 1 |
5AQD_PEB_F_166 | 79% | 4% | 0.096 | 0.941 | 3.17 | 2.62 | 9 | 18 | 1 | 0 | 100% | 1 |
5AQD_PEB_N_188 | 78% | 5% | 0.1 | 0.943 | 3.35 | 2.12 | 8 | 14 | 2 | 0 | 100% | 1 |
5AQD_PEB_S_188 | 78% | 4% | 0.103 | 0.946 | 3.49 | 2.09 | 11 | 14 | 2 | 0 | 100% | 1 |
5AQD_PEB_K_166 | 78% | 4% | 0.097 | 0.938 | 3.29 | 2.41 | 10 | 16 | 2 | 0 | 100% | 1 |
5AQD_PEB_W_188 | 77% | 5% | 0.102 | 0.942 | 3.43 | 1.96 | 9 | 16 | 1 | 0 | 100% | 1 |
5AQD_PEB_I_166 | 77% | 4% | 0.097 | 0.936 | 3.42 | 2.44 | 11 | 18 | 1 | 0 | 100% | 1 |
5AQD_PEB_E_166 | 77% | 4% | 0.105 | 0.943 | 3.39 | 2.36 | 10 | 17 | 1 | 0 | 100% | 1 |
5AQD_PEB_P_188 | 76% | 5% | 0.096 | 0.932 | 3.41 | 2.07 | 11 | 16 | 1 | 0 | 100% | 1 |
5AQD_PEB_Q_188 | 76% | 4% | 0.101 | 0.937 | 3.47 | 2.09 | 10 | 14 | 3 | 0 | 100% | 1 |
5AQD_PEB_R_188 | 76% | 5% | 0.102 | 0.937 | 3.43 | 2.02 | 10 | 17 | 1 | 0 | 100% | 1 |
5AQD_PEB_O_188 | 75% | 4% | 0.11 | 0.943 | 3.38 | 2.18 | 11 | 16 | 0 | 0 | 100% | 1 |
5AQD_PEB_C_166 | 75% | 4% | 0.103 | 0.935 | 3.33 | 2.46 | 10 | 20 | 1 | 0 | 100% | 1 |
5AQD_PEB_H_166 | 74% | 4% | 0.106 | 0.935 | 3.38 | 2.32 | 11 | 18 | 0 | 0 | 100% | 1 |
5AQD_PEB_A_167 | 73% | 6% | 0.107 | 0.934 | 3.3 | 1.92 | 9 | 13 | 0 | 0 | 100% | 1 |
5AQD_PEB_M_187 | 71% | 5% | 0.104 | 0.923 | 3.25 | 2.11 | 8 | 14 | 2 | 0 | 100% | 1 |
5AQD_PEB_V_187 | 70% | 5% | 0.106 | 0.923 | 3.35 | 2 | 11 | 17 | 0 | 0 | 100% | 1 |
5AQD_PEB_N_187 | 69% | 5% | 0.112 | 0.926 | 3.41 | 1.99 | 11 | 15 | 0 | 0 | 100% | 1 |
5AQD_PEB_T_188 | 69% | 4% | 0.113 | 0.927 | 3.52 | 2.09 | 12 | 15 | 3 | 0 | 100% | 1 |
5AQD_PEB_W_186 | 69% | 5% | 0.116 | 0.929 | 3.44 | 2.05 | 8 | 17 | 0 | 0 | 100% | 1 |
5AQD_PEB_M_186 | 67% | 5% | 0.113 | 0.921 | 3.43 | 2.07 | 8 | 16 | 0 | 0 | 100% | 1 |
5AQD_PEB_W_187 | 67% | 5% | 0.122 | 0.929 | 3.24 | 2.03 | 10 | 17 | 1 | 0 | 100% | 1 |
5AQD_PEB_B_167 | 66% | 5% | 0.132 | 0.937 | 3.31 | 2.06 | 11 | 16 | 1 | 0 | 100% | 1 |
5AQD_PEB_R_186 | 66% | 5% | 0.114 | 0.917 | 3.49 | 2 | 10 | 15 | 0 | 0 | 100% | 1 |
5AQD_PEB_L_167 | 65% | 5% | 0.119 | 0.919 | 3.19 | 2.04 | 8 | 15 | 1 | 0 | 100% | 1 |
5AQD_PEB_N_186 | 64% | 4% | 0.131 | 0.93 | 3.43 | 2.1 | 10 | 15 | 0 | 0 | 100% | 1 |
5AQD_PEB_U_187 | 63% | 5% | 0.119 | 0.913 | 3.41 | 2.08 | 9 | 16 | 0 | 0 | 100% | 1 |
5AQD_PEB_U_186 | 63% | 4% | 0.129 | 0.923 | 3.56 | 2.33 | 10 | 15 | 2 | 0 | 100% | 1 |
5AQD_PEB_C_167 | 63% | 6% | 0.131 | 0.925 | 3.28 | 1.9 | 11 | 12 | 1 | 0 | 100% | 1 |
5AQD_PEB_Q_187 | 62% | 4% | 0.125 | 0.917 | 3.55 | 2.05 | 12 | 15 | 1 | 0 | 100% | 1 |
5AQD_PEB_X_186 | 62% | 4% | 0.128 | 0.92 | 3.39 | 2.21 | 9 | 17 | 1 | 0 | 100% | 1 |
5AQD_PEB_S_186 | 61% | 4% | 0.123 | 0.912 | 3.51 | 2.12 | 11 | 15 | 1 | 0 | 100% | 1 |
5AQD_PEB_X_187 | 61% | 5% | 0.122 | 0.909 | 3.29 | 2.1 | 11 | 15 | 0 | 0 | 100% | 1 |
5AQD_PEB_O_186 | 59% | 4% | 0.114 | 0.896 | 3.38 | 2.27 | 11 | 17 | 0 | 0 | 100% | 1 |
5AQD_PEB_P_186 | 58% | 4% | 0.13 | 0.909 | 3.45 | 2.27 | 9 | 19 | 1 | 0 | 100% | 1 |
5AQD_PEB_J_167 | 58% | 5% | 0.132 | 0.911 | 3.3 | 1.97 | 9 | 14 | 1 | 0 | 100% | 1 |
5AQD_PEB_O_187 | 58% | 6% | 0.12 | 0.898 | 3.3 | 1.86 | 10 | 13 | 1 | 0 | 100% | 1 |
5AQD_PEB_S_187 | 57% | 5% | 0.136 | 0.912 | 3.37 | 2.02 | 10 | 15 | 1 | 0 | 100% | 1 |
5AQD_PEB_T_186 | 57% | 4% | 0.134 | 0.909 | 3.33 | 2.4 | 9 | 15 | 1 | 0 | 100% | 1 |
5AQD_PEB_T_187 | 57% | 5% | 0.128 | 0.902 | 3.34 | 2.05 | 10 | 16 | 0 | 0 | 100% | 1 |
5AQD_PEB_V_186 | 57% | 4% | 0.115 | 0.888 | 3.34 | 2.46 | 10 | 17 | 1 | 0 | 100% | 1 |
5AQD_PEB_D_167 | 56% | 4% | 0.132 | 0.904 | 3.34 | 2.33 | 10 | 16 | 0 | 0 | 100% | 1 |
5AQD_PEB_Q_186 | 55% | 5% | 0.134 | 0.902 | 3.37 | 2.15 | 9 | 15 | 1 | 0 | 100% | 1 |
5AQD_PEB_P_187 | 54% | 5% | 0.128 | 0.893 | 3.4 | 1.91 | 8 | 15 | 1 | 0 | 100% | 1 |
5AQD_PEB_I_167 | 51% | 4% | 0.137 | 0.891 | 3.28 | 2.28 | 10 | 16 | 1 | 0 | 100% | 1 |
5AQD_PEB_K_167 | 49% | 5% | 0.154 | 0.9 | 3.3 | 2.02 | 12 | 14 | 1 | 0 | 100% | 1 |
5AQD_PEB_R_187 | 44% | 5% | 0.152 | 0.88 | 3.28 | 1.99 | 10 | 16 | 2 | 0 | 100% | 1 |
5NB3_PEB_H_166 | 98% | 4% | 0.053 | 0.974 | 3.32 | 2.44 | 8 | 14 | 5 | 0 | 100% | 1 |
7AP5_PEB_DDD_203 | 90% | 30% | 0.086 | 0.97 | 1.53 | 1.25 | 2 | 6 | 0 | 0 | 100% | 1 |
5FVB_PEB_L_202 | 88% | 5% | 0.087 | 0.964 | 3.26 | 2 | 8 | 14 | 1 | 0 | 100% | 1 |
3V57_PEB_B_205 | 95% | 4% | 0.065 | 0.967 | 3.31 | 2.5 | 9 | 16 | 0 | 0 | 100% | 1 |
7SSF_PEB_A_101 | 93% | 4% | 0.073 | 0.966 | 3.39 | 2.19 | 25 | 15 | 0 | 0 | 100% | 1 |
7SUT_PEB_B_203 | 93% | 4% | 0.072 | 0.965 | 3.83 | 1.96 | 26 | 16 | 1 | 0 | 100% | 1 |
4LMX_PEB_H_203 | 92% | 12% | 0.077 | 0.968 | 2.37 | 1.76 | 6 | 11 | 0 | 0 | 100% | 1 |
1B8D_PEB_K_206 | 91% | 19% | 0.076 | 0.963 | 1.86 | 1.6 | 7 | 8 | 1 | 0 | 100% | 1 |