XYP: beta-D-xylopyranose
XYP is a Ligand Of Interest in 5UN3 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5UN3_XYP_A_355 | 63% | 28% | 0.108 | 0.901 | 1.98 | 0.94 | 2 | 1 | 1 | 0 | 100% | 0.876 |
5UN3_XYP_A_352 | 27% | 37% | 0.172 | 0.819 | 1.87 | 0.65 | 3 | - | 0 | 0 | 100% | 0.818 |
5UN3_XYP_A_354 | 20% | 20% | 0.188 | 0.792 | 2.04 | 1.33 | 3 | 1 | 0 | 0 | 100% | 0.757 |
5UN3_XYP_A_357 | 12% | 21% | 0.219 | 0.748 | 1.87 | 1.48 | 3 | 1 | 3 | 0 | 100% | 0.822 |
5UN3_XYP_A_353 | 6% | 24% | 0.239 | 0.67 | 1.94 | 1.18 | 3 | 3 | 0 | 0 | 100% | 0.75 |
5UUB_XYP_A_419 | 71% | 22% | 0.093 | 0.913 | 2.11 | 1.14 | 2 | - | 0 | 0 | 100% | 0.837 |
6N4W_XYP_A_414 | 69% | 36% | 0.118 | 0.933 | 1.76 | 0.79 | 3 | - | 0 | 0 | 100% | 0.781 |
6N4Z_XYP_A_413 | 60% | 40% | 0.127 | 0.913 | 1.81 | 0.55 | 3 | - | 0 | 0 | 100% | 0.776 |
5UUA_XYP_A_416 | 59% | 36% | 0.125 | 0.906 | 1.54 | 0.98 | 1 | 1 | 0 | 0 | 100% | 0.86 |
5UU9_XYP_A_409 | 43% | 38% | 0.137 | 0.859 | 1.61 | 0.85 | 1 | 1 | 1 | 0 | 100% | 0.8 |
1OD8_XYP_A_1311 | 100% | 64% | 0.047 | 0.992 | 0.75 | 0.64 | - | - | 0 | 0 | 100% | 1 |
1V0M_XYP_A_1304 | 100% | 71% | 0.035 | 0.993 | 0.82 | 0.33 | - | - | 0 | 0 | 90% | 0.9 |
2WYS_XYP_A_1001 | 99% | 38% | 0.052 | 0.983 | 0.69 | 1.7 | - | 4 | 3 | 0 | 100% | 1 |
1V0N_XYP_A_1306 | 98% | 60% | 0.048 | 0.989 | 0.76 | 0.78 | - | - | 0 | 0 | 90% | 0.9 |
1V0L_XYP_A_1305 | 98% | 72% | 0.055 | 0.992 | 0.52 | 0.57 | - | - | 0 | 0 | 90% | 0.9 |