Ligand validation:5YQS

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5YQS designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5YQS_NAG_A_804	86%	48%	0.066	0.934	0.49	1.49	-	3	0	0	100%	0.9333
5YQS_NAG_B_804	76%	39%	0.078	0.913	0.5	1.85	-	4	0	0	100%	0.9333
5YQS_NAG_B_809	57%	43%	0.093	0.866	0.68	1.49	-	2	0	0	100%	0.9333
5YQS_NAG_A_809	53%	47%	0.103	0.863	0.64	1.39	-	2	0	0	100%	0.9333
5YQS_NAG_B_810	52%	47%	0.117	0.872	0.64	1.39	-	4	0	0	100%	0.9333
5YQS_NAG_B_801	51%	50%	0.11	0.861	0.57	1.35	-	2	0	0	100%	0.9333
5YQS_NAG_A_801	34%	31%	0.129	0.812	0.67	2.03	-	7	0	0	100%	0.9333
5YQS_NAG_A_811	33%	48%	0.133	0.807	0.63	1.37	-	3	0	0	100%	0.9333
5YQS_NAG_A_810	27%	30%	0.147	0.792	0.99	1.77	-	5	0	0	100%	0.9333
7EAP_NAG_A_805	87%	43%	0.086	0.956	0.86	1.35	-	3	0	0	100%	0.9333
5YOT_NAG_B_811	78%	48%	0.08	0.922	0.61	1.37	-	3	0	0	100%	0.9333
3H0C_NAG_A_796	100%	58%	0.02	0.995	0.47	1.12	-	1	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3GXM_NAG_A_498	100%	45%	0.026	0.992	0.75	1.34	-	2	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.