GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6DZH designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6DZH_GDP_A_201 | 94% | 45% | 0.086 | 0.985 | 0.88 | 1.22 | 1 | 4 | 0 | 0 | 100% | 1 |
| 6DZH_GDP_B_201 | 90% | 45% | 0.092 | 0.975 | 0.92 | 1.21 | - | 5 | 3 | 0 | 100% | 1 |
| 6DZH_GDP_C_201 | 87% | 44% | 0.095 | 0.968 | 0.91 | 1.24 | 1 | 4 | 1 | 0 | 100% | 1 |
| 8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
| 5E95_GDP_A_201 | 99% | 49% | 0.054 | 0.988 | 0.95 | 1.03 | 1 | 1 | 0 | 0 | 100% | 1 |
| 6MQT_GDP_B_201 | 99% | 66% | 0.055 | 0.985 | 0.83 | 0.5 | 2 | - | 0 | 0 | 100% | 0.9975 |
| 1ZVQ_GDP_A_180 | 97% | 45% | 0.064 | 0.982 | 0.93 | 1.17 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8CNN_GDP_A_206 | 97% | 52% | 0.067 | 0.985 | 0.99 | 0.86 | 1 | 1 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 4PZZ_GDP_A_201 | 100% | 54% | 0.035 | 0.989 | 0.92 | 0.86 | 1 | 1 | 0 | 0 | 100% | 1 |
