GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 6IY1 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
6IY1_GDP_A_201 90% 44% 0.092 0.9740.96 1.18 1 300100%1
6IY1_GDP_C_201 89% 43% 0.093 0.9731.03 1.16 1 310100%1
6IY1_GDP_D_201 89% 45% 0.092 0.970.95 1.16 1 210100%1
6IY1_GDP_F_201 88% 44% 0.097 0.9730.99 1.16 1 300100%1
6IY1_GDP_B_201 88% 46% 0.095 0.9691 1.09 1 210100%1
6IY1_GDP_E_201 88% 46% 0.097 0.9710.94 1.13 1 310100%1
4LX0_GDP_C_203 93% 37% 0.089 0.9861.02 1.42 2 600100%1
1OIX_GDP_A_201 93% 28% 0.081 0.9761.52 1.35 4 400100%1
1OIV_GDP_B_1175 87% 31% 0.102 0.9731.39 1.37 3 500100%1
5JCZ_GDP_D_202 86% 45% 0.113 0.9830.93 1.19 1 310100%1
4LWZ_GDP_A_201 86% 40% 0.111 0.9791.03 1.31 1 410100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1
2CXX_GDP_B_2401 100% 29% 0.031 0.9891.26 1.57 1 300100%1
4LUC_GDP_A_204 100% 40% 0.036 0.9921.22 1.11 2 200100%1
5YMX_GDP_A_301 100% 54% 0.038 0.9940.92 0.85 1 -20100%1
4PZZ_GDP_A_201 100% 54% 0.035 0.9890.92 0.86 1 100100%1