Characterization of the Active Site of UDP-sulfoquinovose Synthase: Formation of the Sulfonic Acid Product in the Crystalline State
Theisen, M.J., Sanda, S.L., Ginell, S.L., Benning, C., Garavito, R.M.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
SULFOLIPID BIOSYNTHESIS PROTEIN SQD1 | 404 | Arabidopsis thaliana | Mutation(s): 1  Gene Names: SQD1 EC: 3.13.1.1 | ||
UniProt | |||||
Find proteins for O48917 (Arabidopsis thaliana) Explore O48917  Go to UniProtKB:  O48917 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O48917 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 4 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAD Query on NAD | D [auth A] | NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N | |||
USQ Query on USQ | F [auth A] | SULFOQUINOVOSE-URIDINE-C1,5'-DIPHOSPHATE C15 H24 N2 O19 P2 S FQANCGQCBCUSMI-JZMIEXBBSA-N | |||
UPG Query on UPG | E [auth A] | URIDINE-5'-DIPHOSPHATE-GLUCOSE C15 H24 N2 O17 P2 HSCJRCZFDFQWRP-JZMIEXBBSA-N | |||
SO4 Query on SO4 | B [auth A], C [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 159.644 | α = 90 |
b = 159.644 | β = 90 |
c = 99.106 | γ = 90 |
Software Name | Purpose |
---|---|
CrystalClear | data collection |
DENZO | data reduction |
SCALEPACK | data scaling |
CCP4 | data reduction |
CNS | refinement |
CrystalClear | data reduction |
CCP4 | data scaling |
CNS | phasing |