Download MendeleyBinding of coumarins to NAD(P)H:FMN oxidoreductase
Kobori, T., Koike, H., Sasaki, H., Zenno, S., Saigo, K., Tanokura, M.To be published.
1V5Y
Binding of coumarins to NAD(P)H:FMN oxidoreductase
- PDB DOI: https://doi.org/10.2210/pdb1V5Y/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Aliivibrio fischeri
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2003-11-26 Released: 2005-03-08
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.226
- R-Value Work: 0.185
- R-Value Observed: 0.185
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Major NAD(P)H-flavin oxidoreductase | 217 | Aliivibrio fischeri | Mutation(s): 0 Gene Names: FRaseI EC: 1.6.99 |  | |
UniProt | |||||
Find proteins for P46072 (Aliivibrio fischeri) Explore P46072 Go to UniProtKB: P46072 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P46072 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| FMN Query on FMN | C [auth A], E [auth B] | FLAVIN MONONUCLEOTIDE C17 H21 N4 O9 P FVTCRASFADXXNN-SCRDCRAPSA-N |  | ||
| 4HC Query on 4HC | D [auth A], F [auth B] | 4-HYDROXY-2H-CHROMEN-2-ONE C9 H6 O3 VXIXUWQIVKSKSA-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.226
- R-Value Work: 0.185
- R-Value Observed: 0.185
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 101.6 | α = 90 |
| b = 63.3 | β = 100 |
| c = 74.4 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| DM | model building |
| X-PLOR | refinement |
| DM | phasing |
Entry History
Deposition Data
- Released Date: 2005-03-08 Deposition Author(s): Kobori, T., Koike, H., Sasaki, H., Zenno, S., Saigo, K., Tanokura, M.
Revision History (Full details and data files)
- Version 1.0: 2005-03-08
Type: Initial release - Version 1.1: 2008-04-27
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2023-12-27
Changes: Data collection, Database references, Derived calculations
