2DRJ

Xray structure of alpha-2,3/8-sialyltransferase CstII F91Y mutant


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.261 
  • R-Value Work: 0.194 
  • R-Value Observed: 0.197 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.5 of the entry. See complete history


Literature

High-throughput screening methodology for the directed evolution of glycosyltransferases

Aharoni, A.Thieme, K.Chiu, C.P.C.Buchini, S.Lairson, L.L.Chen, H.Strynadka, N.C.J.Wakarchuk, W.W.Withers, S.G.

(2006) Nat Methods 3: 609-614


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Alpha-2,3/8-sialyltransferase262Campylobacter jejuniMutation(s): 3 
EC: 2.4.99
UniProt
Find proteins for Q9LAK3 (Campylobacter jejuni)
Explore Q9LAK3 
Go to UniProtKB:  Q9LAK3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9LAK3
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.261 
  • R-Value Work: 0.194 
  • R-Value Observed: 0.197 
  • Space Group: I 4
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 116.653α = 90
b = 116.653β = 90
c = 44.086γ = 90
Software Package:
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
MOLREPphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2007-04-24
    Type: Initial release
  • Version 1.1: 2008-04-30
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2017-10-11
    Changes: Refinement description
  • Version 1.4: 2021-11-10
    Changes: Database references, Derived calculations
  • Version 1.5: 2023-10-25
    Changes: Data collection, Refinement description