Download MendeleyCrystal Structure of T.th.HB8 Argininosuccinate lyase complexed with L-Arginine
Goto, M.To be published.
2E9F
Crystal Structure of T.th.HB8 Argininosuccinate lyase complexed with L-Arginine
- PDB DOI: https://doi.org/10.2210/pdb2E9F/pdb
- Classification: LYASE
- Organism(s): Thermus thermophilus HB8
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2007-01-25 Released: 2007-07-31
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.271
- R-Value Work: 0.205
- R-Value Observed: 0.205
Starting Model: experimental
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This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Argininosuccinate lyase | 462 | Thermus thermophilus HB8 | Mutation(s): 0 EC: 4.3.2.1 |  | |
UniProt | |||||
Find proteins for Q5SLL0 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Explore Q5SLL0 Go to UniProtKB: Q5SLL0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5SLL0 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ARG Query on ARG | E [auth B], F [auth B], G [auth B], H [auth B] | ARGININE C6 H15 N4 O2 ODKSFYDXXFIFQN-BYPYZUCNSA-O |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.271
- R-Value Work: 0.205
- R-Value Observed: 0.205
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 78.336 | α = 90 |
| b = 119.787 | β = 90 |
| c = 257.839 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| MAR345 | data collection |
| MOSFLM | data reduction |
| SCALA | data scaling |
| AMoRE | phasing |
Entry History
Deposition Data
- Released Date: 2007-07-31 Deposition Author(s): Goto, M.
Revision History (Full details and data files)
- Version 1.0: 2007-07-31
Type: Initial release - Version 1.1: 2011-07-13
Changes: Derived calculations, Source and taxonomy, Version format compliance - Version 1.2: 2017-10-11
Changes: Refinement description - Version 1.3: 2023-10-25
Changes: Data collection, Database references, Derived calculations, Refinement description
