Download MendeleyCrystal structure of l-fuconate dehydratase from xanthomonas campestris pv. campestris str. ATCC 33913
Fedorov, A.A., Fedorov, E.V., Yew, W.S., Gerlt, J.A., Almo, S.C.To be published.
2HNE
Crystal structure of l-fuconate dehydratase from xanthomonas campestris pv. campestris str. ATCC 33913
- PDB DOI: https://doi.org/10.2210/pdb2HNE/pdb
- Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION
- Organism(s): Xanthomonas campestris pv. campestris
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2006-07-12 Released: 2006-07-25
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.274
- R-Value Work: 0.241
- R-Value Observed: 0.241
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.5 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| L-fuconate dehydratase | 436 | Xanthomonas campestris pv. campestris | Mutation(s): 0 EC: 4.2.1.68 |  | |
UniProt | |||||
Find proteins for Q8P3K2 (Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)) Explore Q8P3K2 Go to UniProtKB: Q8P3K2 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8P3K2 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | E [auth A], F [auth B], G [auth C], H [auth D] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.274
- R-Value Work: 0.241
- R-Value Observed: 0.241
- Space Group: P 32 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 130.633 | α = 90 |
| b = 130.633 | β = 90 |
| c = 195.829 | γ = 120 |
| Software Name | Purpose |
|---|---|
| CNS | refinement |
| DENZO | data reduction |
| SCALEPACK | data scaling |
| EPMR | phasing |
Entry History
Deposition Data
- Released Date: 2006-07-25 Deposition Author(s): Fedorov, A.A., Fedorov, E.V., Yew, W.S., Gerlt, J.A., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2006-07-25
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2013-01-23
Changes: Structure summary - Version 1.4: 2021-02-03
Changes: Derived calculations, Structure summary - Version 1.5: 2023-08-30
Changes: Data collection, Database references, Refinement description
