Download MendeleyTruncated APS kinase from Pencillium chrysogenum: Insight into the function of the N-terminal helix
Gay, S.C., Segel, I.H., Fisher, A.J.To be published.
3CR7
Crystal structure of N-terminal truncation of APS Kinase from Penicillium chrysogenum: Ternary structure with ADP and PAPS
- PDB DOI: https://doi.org/10.2210/pdb3CR7/pdb
- Classification: TRANSFERASE
- Organism(s): Penicillium chrysogenum
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2008-04-04 Released: 2009-02-17
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.279
- R-Value Work: 0.198
- R-Value Observed: 0.201
Starting Model: experimental
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This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Adenylyl-sulfate kinase | 197 | Penicillium chrysogenum | Mutation(s): 0 EC: 2.7.1.25 |  | |
UniProt | |||||
Find proteins for Q12657 (Penicillium chrysogenum) Explore Q12657 Go to UniProtKB: Q12657 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q12657 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PPS Query on PPS | G [auth A], L [auth C] | 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE C10 H15 N5 O13 P2 S GACDQMDRPRGCTN-KQYNXXCUSA-N |  | ||
| ADP Query on ADP | F [auth A], I [auth B], K [auth C], M [auth D] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N |  | ||
| CL Query on CL | E [auth A], H [auth B], J [auth C] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.50 Å
- R-Value Free: 0.279
- R-Value Work: 0.198
- R-Value Observed: 0.201
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 77.58 | α = 90 |
| b = 82.594 | β = 90 |
| c = 139.009 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SCALA | data scaling |
| EPMR | phasing |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| Blu-Ice | data collection |
| MOSFLM | data reduction |
Entry History
Deposition Data
- Released Date: 2009-02-17 Deposition Author(s): Gay, S.C., Segel, I.H., Fisher, A.J.
Revision History (Full details and data files)
- Version 1.0: 2009-02-17
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2023-08-30
Changes: Data collection, Database references, Derived calculations, Refinement description
