Download MendeleyCrystal structure of XometC, a cystathionine c-lyase-like protein from Xanthomonas oryzae pv.oryzae
Ngo, H.P.T., Kim, J.K., Kim, H.S., Jung, J.H., Ahn, Y.J., Kim, J.G., Lee, B.M., Kang, H.W., Kang, L.W.To be published.
3E6G
Crystal structure of XometC, a cystathionine c-lyase-like protein from Xanthomonas oryzae pv.oryzae
- PDB DOI: https://doi.org/10.2210/pdb3E6G/pdb
- Classification: LYASE
- Organism(s): Xanthomonas oryzae pv. oryzae
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2008-08-15 Released: 2009-08-18
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.295
- R-Value Work: 0.216
- R-Value Observed: 0.220
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Cystathionine gamma-lyase-like protein | 400 | Xanthomonas oryzae pv. oryzae | Mutation(s): 0 Gene Names: metB, XOO0778 |  | |
UniProt | |||||
Find proteins for Q5H4T8 (Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85)) Explore Q5H4T8 Go to UniProtKB: Q5H4T8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q5H4T8 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.80 Å
- R-Value Free: 0.295
- R-Value Work: 0.216
- R-Value Observed: 0.220
- Space Group: P 41
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 78.351 | α = 90 |
| b = 78.351 | β = 90 |
| c = 300.989 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data collection |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
| PHASES | phasing |
Entry History
Deposition Data
- Released Date: 2009-08-18 Deposition Author(s): Ngo, H.P.T., Kim, J.K., Kim, H.S., Jung, J.H., Ahn, Y.J., Kim, J.G., Lee, B.M., Kang, H.W., Kang, L.W.
Revision History (Full details and data files)
- Version 1.0: 2009-08-18
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2023-11-01
Changes: Data collection, Database references, Refinement description
