Crystal structure of a UMP/dUMP methylase PolB form Streptomyces cacaoi bound with 5-Br dUMP
Li, Y., Chen, W., Li, J., Xia, Z., Deng, Z., Zhou, J.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Thymidylate synthase ThyX | 239 | Streptomyces asoensis | Mutation(s): 0  Gene Names: polB, thyX EC: 2.1.1.148 | ||
UniProt | |||||
Find proteins for C1IC19 (Streptomyces asoensis) Explore C1IC19  Go to UniProtKB:  C1IC19 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | C1IC19 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FAD Query on FAD | E [auth A], I [auth B], J [auth C], M [auth D] | FLAVIN-ADENINE DINUCLEOTIDE C27 H33 N9 O15 P2 VWWQXMAJTJZDQX-UYBVJOGSSA-N | |||
BRU Query on BRU | F [auth A], H [auth B], K [auth C], L [auth D] | 5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE C9 H12 Br N2 O8 P LHLHVDBXXZVYJT-RRKCRQDMSA-N | |||
SO4 Query on SO4 | G [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 170.788 | α = 90 |
b = 59.502 | β = 120.31 |
c = 118.981 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |